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September Publications

October 6, 2020

Primordial Gravitational Waves; Evidence for the Pleistocene Arc Hypothesis; Spindle Dynamic in Nematode Evolution - Intrigued?  Read about these and more in our selection of September publications from the MGHPCC.
Below is a selection of papers that appeared in May 2020  reporting the results of research using the Massachusetts Green High Performance Computing Center (MGHPCC), or acknowledging the use of Harvard’s Odyssey or Cannon Clusters, Northeastern’s Discovery Cluster, the Boston University Shared Computing Cluster, and MIT’s Engaging Cluster all of which are housed at the MGHPCC.
Jonathan Carifio (2020), Examining the String Landscape Using Data Science and Network Techniques, Northeastern University Doctoral Dissertation
The CMB-S4 Collaboration: Krevork Abazaian et al (2020), CMB-S4: Forecasting Constraints on Primordial Gravitational Waves, arXiv:2008.12619 [astro-ph.CO]
Eamon C. Corbett, Gustavo A. Bravo, Fabio Schunck, Luciano N. Naka, Luís F. Silveira, Scott V. Edwards (2020), Evidence for the Pleistocene Arc Hypothesis from genome‐wide SNPs in a Neotropical dry forest specialist, the Rufous‐fronted Thornbird (Furnariidae: Phacellodomus rufifrons), Molecular Ecology, doi: 10.1111/mec.15640
Kaustav K. Das, Catherine Zucker, Joshua S. Speagle, Alyssa Goodman, Gregory M. Green, and João Alves (2020), Constraining the Distance to the North Polar Spur with Gaia DR2, arXiv:2009.01320 [astro-ph.GA]
Reza Farhadifar, Che-Hang Yu, Gunar Fabig, Hai-Yin Wu, David B Stein, Matthew Rockman, Thomas Mueller-Reichert, Michael J Shelley, Daniel J Needleman (2020), Stoichiometric interactions explain spindle dynamics and scaling across 100 million years of nematode evolution, eLife, doi: 10.7554/eLife.55877
Jafarzanjani, Samad (2020), Numerical Modeling and Design Optimization of Metamaterials, Northeastern University Doctoral Dissertation
Justine Kozubal, Tristan Heck, and Ricardo B. Metz (2020), Vibrational Spectroscopy of Intermediates and C–H Activation Products of Sequential Zr+ Reactions with CH4, J. Phys. Chem. A, doi: 10.1021/acs.jpca.0c07027
Jingbai Li and Steven A Lopez (2020), Multiconfigurational Calculations and Non-Adiabatic Molecular Dynamics Explain Tricyclooctadiene Photochemical Chemoselectivity, J. Phys. Chem. A, doi: 10.1021/acs.jpca.0c05280
Dongyue Liang, Udaya Dahal, Meng Wu, Catherine J. Murphy, and Qiang Cui (2020), Ligand Length and Surface Curvature Modulate Nanoparticle Surface Heterogeneity and Electrostatics, J. Phys. Chem. C, doi: 10.1021/acs.jpcc.0c08387
A. Mathews, M. Francisquez, J.W. Hughes, and D.R. Hatch (2020), Uncovering edge plasma dynamics via deep learning from partial observations, arXiv:2009.05005 [physics.plasm-ph]
Jorge Moreno, Paul Torrey, Sara L. Ellison, David R. Patton, Connor Bottrell, Asa F. L. Bluck, Maan H. Hani, Christopher C. Hayward, James S. Bullock, Philip F. Hopkins, and Lars Hernquist (2020), Spatially resolved star formation and fuelling in galaxy interactions, arXiv:2009.11289 [astro-ph.GA]
Pranay Patil, Hui Shao, and Anders W. Sandvik (2020), Anomalous U(1) to Zq cross-over in quantum and classical q-state clock models, arXiv:2009.03249 [cond-mat.str-el]
Jason W. Rocks and Pankaj Mehta (2020), Memorizing without overfitting: Bias, variance, and interpolation in over-parameterized models, arXiv:2010.13933 [stat.ML]
Andrew K. Saydjari et al (2020), Classification of Magnetohydrodynamic Simulations using Wavelet Scattering Transforms, arXiv: 2010.11963 [astro-ph.GA]
Do you have news about research using computing resources at the MGHPCC? If you have an interesting project that you want to tell people about or a paper you would like listed, contact hlh@mit.edu

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MGHPCC Publications

Research projects

Dusty With a Chance of Star Formation
Checking the Medicine Cabinet to Interrupt COVID-19 at the Molecular Level
Not Too Hot, Not Too Cold But Still, Is It Just Right?​
Smashing Discoveries​
Microbiome Pattern Hunting
Modeling the Air we Breathe
Exploring Phytoplankton Diversity
The Computer Will See You Now
Computing the Toll of Trapped Diamondback Terrapins
Edging Towards a Greener Future
Physics-driven Drug Discovery
Modeling Plasma-Surface Interactions
Sensing Subduction Zones
Neural Networks & Earthquakes
Small Stars, Smaller Planets, Big Computing
Data Visualization using Climate Reanalyzer
Getting to Grips with Glassy Materials
Modeling Molecular Engines
Forest Mapping: When the Budworms come to Dinner
Exploring Thermoelectric Behavior at the Nanoscale
The Trickiness of Talking to Computers
A Genomic Take on Geobiology
From Grass to Gas
Teaching Computers to Identify Odors
From Games to Brains
The Trouble with Turbulence
A New Twist
A Little Bit of This... A Little Bit of That..
Looking Like an Alien!
Locking Up Computing
Modeling Supernovae
Sound Solution
Lessons in a Virtual Test Tube​
Higgs Boson Spotted in Holyoke?
Crack Computing
Automated Real-time Medical Imaging Analysis
Towards a Smarter Greener Grid
Heading Off Head Blight
Organic Light-Harvesting Antennae
Art and AI
Excited by Photons
Tapping into an Ocean of Data
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