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September 2025 Publications

October 6, 2025

Secondary atmosphere constraints for the habitable planets? Control of the spatiotemporal quantum noise of light? Data-driven adaptive beamforming techniques? A selection of recent publications featuring research using the MGHPCC.

Das, Arnab et al (2025), Vibrational Spectroscopy of C–H Activation Intermediates and Dehydrogenation Products of Sequential Reactions of Niobium Cation with Methane, The Journal of Physical Chemistry A, doi: 10.1021/acs.jpca.5c05156

da Mota, Achiles F. et al (2025), Dynamics of time-modulated quantum systems via integrated Lindblad and Maxwell–Bloch equations, APL Quantum, doi: 10.1063/5.0271171

Glidden, Ana et al (2025), JWST-TST DREAMS: Secondary Atmosphere Constraints for the Habitable Zone Planet TRAPPIST-1 e, ApJL , doi: 10.3847/2041-8213/adf62e

Gomes L, Ribeiro Sanctis V, Wei Y, Ji T, Dong R, Yang K, et al. (2025), Tetrabutylammonium-Based Organosulfur Counter-Anion Additives on Li-Sulfur Battery Performance, via ChemRxiv., doi: 10.26434/chemrxiv-2025-7l10g

Graff, David E. et al (2025), Chemprop v2: An Efficient, Modular Machine Learning Package for Chemical Property Prediction, via ChemRxiv, doi: 10.26434/chemrxiv-2025-4p1nr

Hakim, Bill et al (2025), Spatial charge-hydrophobicity configuration modulates cationic peptide transport in cartilage, Biophysical Journal, doi: 10.1016/j.bpj.2025.09.023

Harvey, Thomas (2025), The Optimiser Hidden in Plain Sight: Training with the Loss Landscape’s Induced Metric, arXiv: 509.03594 [cs.LG]

Interrante-Grant, Alexander et al (2025), Scaling Performance of Large Language Model Pretraining, arXiv: [cs.DC] 2509.05258

Markiewicz, R.S., M. Matzelle, and A. Bansil (2025), A model for intertwined orders in cuprates, arXiv: 2509.13543  [cond-mat.str-el]

McGrath, Sean et al (2025), Time-smoothed inverse probability weighted estimation of effects of generalized time-varying treatment strategies on repeated outcomes truncated by death, arXiv: 2509.13971 [stat.ME]

Mondal, Mazharul Islam et al (2025), Observation of multiple flat bands and Van Hove singularities in the distorted kagome metal NdTi3⁢Bi4, Phys. Rev. B, doi: 10.1103/mhj5-ws5v

Nguyen, Bao (William) et al (2025), Modulated deuteron spectra observed with the Magnetic Recoil neutron Spectrometer at the National Ignition Facility, arXiv: 2509.06999 [physics.plasm-ph]

Osadchey, Reilly, Kwangho Nam, Qiang Cui (2025), Toward Improving Multiple Time Step QM/MM Simulations with Δ-Machine Learning, The Journal of Physical Chemistry B, doi: 10.1021/acs.jpcb.5c05255

Padgett, R. Noah (2025), Multidimensional constructs and moderated linear and nonlinear factor analysis, arXiv: 2509.05443 [stat.ME]

Rivoire, Louis et al (2025), Tracking atmospheric jets as Lagrangian objects, ESS Open Archive, doi: 10.22541/essoar.175760518.83376258/v1

Sai, Pranav (2025), Semi-Empirical Prediction of Wave Runup During Nor’easters in New England, University of Rhode Island ProQuest Dissertations & Theses,  2025. Masters Thesis 32122092

Shaker, Youssef et al (2025), Multi-sectoral Impacts of H2 and Synthetic Fuels Adoption for Heavy-duty Transportation Decarbonization, arXiv: 2509.10734 [eess.SY]

Shenfield, I et al (2025), Rl’s razor: why online reinforcement learning forgets less, arXiv: 2509.04259 [cs.LG]

Sloan, J et al (2025), Programmable control of the spatiotemporal quantum noise of light, arXiv: 2509.03482 [physics.optics]

Sung, Nicholas et al (2025), BLENDEDNET: a blended wing body aircraft dataset and surrogate model for aerodynamic predictions, arXiv: 2509.07209 [cs.AI]

Rivoire, Louis et al (2025), Tracking atmospheric jets as Lagrangian objects, ESS Open Archive, doi: 10.22541/essoar.175760518.83376258/v1

Shen, Xuejian et al (2025), The Cosmic Rush Hour: Rapid Formation of Bright, Massive, Disky,Star-Forming Galaxies as Signatures of Early-Universe Physics, arXiv: 2509.19427 [astro-ph.GA]

Tang, Lois I. and Kaighin A McColl (2025), Radiative-convective equilibrium over an idealized land surface with fixed soil moisture, Journal of Climate, doi: 10.1175/JCLI-D-24-0438.1

von Maydell, D., Wright, S.E., Pao, PC. et al. (2025), ABCA7 variants impact phosphatidylcholine and mitochondria in neurons, Nature, doi: 10.1038/s41586-025-09520-y

Wentz, Michael (2025), Data-Driven Adaptive Beamforming Techniques for Dynamic Radio Frequency Environments,  Northeastern University ProQuest Dissertations & Theses,  2025. 32238631

Yao, X. et al (2025), Incommensurate magnetic order drives singular angular magnetoresistance in a Weyl semimetal, arXiv: 2509.18398  [cond-mat.str-el]

Yun, Jie et al (2025), Genotype by environment interactions in gene regulation underlie the response to soil drying in the model grass Brachypodium distachyon, Molecular Biology and Evolution, doi: 10.1093/molbev/msaf218

Zentner, Aidan et al (2025), Information processing driven by multicomponent surface condensates, arXiv: 2509.08100 [physics.bio-ph]

Do you have news about research using computing resources at the MGHPCC? If you have an interesting project that you want to tell people about or a paper you would like listed, contact 

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MGHPCC Publications

Research projects

A Future of Unmanned Aerial Vehicles
Yale Budget Lab
Volcanic Eruptions Impact on Stratospheric Chemistry & Ozone
Towards a Whole Brain Cellular Atlas
Tornado Path Detection
The Kempner Institute - Unlocking Intelligence
The Institute for Experiential AI
Taming the Energy Appetite of AI Models
Surface Behavior
Studying Highly Efficient Biological Solar Energy Systems
Software for Unreliable Quantum Computers
Simulating Large Biomolecular Assemblies
SEQer - Sequence Evaluation in Realtime
Revolutionizing Materials Design with Computational Modeling
Remote Sensing of Earth Systems
Quantum Computing in Renewable Energy Development
Pulling Back the Quantum Curtain on ‘Weyl Fermions’
New Insights on Binary Black Holes
NeuraChip
Network Attached FPGAs in the OCT
Monte Carlo eXtreme (MCX) - a Physically-Accurate Photon Simulator
Modeling Hydrogels and Elastomers
Modeling Breast Cancer Spread
Impact of Marine Heatwaves on Coral Diversity
IceCube: Hunting Neutrinos
Genome Forecasting
Global Consequences of Warming-Induced Arctic River Changes
Exact Gravitational Lensing by Rotating Black Holes
Evolution of Viral Infectious Disease
Evaluating Health Benefits of Stricter US Air Quality Standards
Ephemeral Stream Water Contributions to US Drainage Networks
Energy Transport and Ultrafast Spectroscopy Lab
Electron Heating in Kinetic-Alfvén-Wave Turbulence
Discovering Evolution’s Master Switches
Dexterous Robotic Hands
Developing Advanced Materials for a Sustainable Energy Future
Detecting Protein Concentrations in Assays
Denser Environments Cultivate Larger Galaxies
Deciphering Alzheimer's Disease
Dancing Frog Genomes
Cyber-Physical Communication Network Security
Asteroid Data Mining
Analyzing the Gut Microbiome
Adaptive Deep Learning Systems Towards Edge Intelligence
Accelerating Rendering Power
ACAS X: A Family of Next-Generation Collision Avoidance Systems
Neurocognition at the Wu Tsai Institute, Yale
Computational Modeling of Biological Systems
Computational Molecular Ecology
Social Capital and Economic Mobility
Building for Floods
Better Pathogen Targeting
Tracking Environmental Health Risks
AI for Cancer Diagnosis
Microplastic-Free by Design
Supporting Data-intensive Social Science
Sailing the Symbiosis Seascape
Wrangle Range Modeling
Shining a Light on Dark Matter
Grid Responsive Data Centers
Multifunctional 3D-Printed Materials
AI Pareidolia
Computing Hidden Health Threats from Heat
Staving off the Banana Apocalypse
CRISPR Mice, Smarter Science
Naval and Ocean Renewable Energy Hydrodynamics
AI That Speaks Human About Health
A Safer Way to See Inside Cells
How Monkeys - and Machines - See in 3D
FlowER: AI for Predicting Chemical Reactions
Bone Ratios and Big Data
Supercomputers Reveal Ancient Atmospheric Battle
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