November 5, 2020

Magnetohydrodynamic simulations using wavelet scattering transforms; Terahertz radiation processes; Topological energy pumps? Read about these and more in our selection of October publications from the MGHPCC.

Scott E. Field, Sigal Gottlieb, Zachary J. Grant, Leah F. Isherwood, Gaurav Khanna (2020), A GPU-accelerated mixed-precision WENO method for extremal black hole and gravitational wave physics computations, arXiv: 2010.04760 [math.NA] 

Meng Gu et al (2020), Coordinated Assembly of Galaxy Groups and Clusters in the IllustrisTNG Simulations, arXiv: 2010.04166 [astro-ph.GA]  

Florian H¨ase et al (2020), Olympus: a benchmarking framework for noisy optimization and experiment planning, arXiv:2010.04154 [stat.ML]  

Jafarzanjani, Samad (2020), Numerical Modeling and Design Optimization of Metamaterials, Northeastern University Doctoral Dissertation

Rui Lai and Qiang Cui (2020), Differences in the Nature of the Phosphoryl Transfer Transition State in Protein Phosphatase 1 and Alkaline Phosphatase: Insights from QM Cluster Models, J. Phys. Chem B, doi: 10.1021/acs.jpcb.0c07863

Longxiang Li, Annelise J. Blomberg, John D. Spengler, Brent A. Coull, Joel D. Schwartz & Petros Koutrakis (2020), Unconventional oil and gas development and ambient particle radioactivity, Nature Communications, doi: 10.1038/s41467-020-18226-w

Yuyu Li and  Roberto Paiella (2020), Terahertz radiation processes in critically coupled graphene plasmonic nanostructures, Journal of Applied Physics, doi: 10.1063/5.0027159

Dongyue Liang, Udaya Dahal, Meng Wu, Catherine J. Murphy, and Qiang Cui (2020), Ligand Length and Surface Curvature Modulate Nanoparticle Surface Heterogeneity and Electrostatics, J. Phys. Chem. C, doi: 10.1021/acs.jpcc.0c08387

David M. Long, Philip J. D. Crowley, and Anushya Chandran (2020), Non-adiabatic topological energy pumps with quasiperiodic driving, arXiv:2010.02228 [cond-mat.mes-hall] 

Kyle J. McCulloch, and Kristen M. Koenig (2020), Krüppel-like factor/specificity protein evolution in the Spiralia and the implications for cephalopod visual system novelties, Proceedings of the Royal Society B, doi: 10.1098/rspb.2020.2055

Odintsova, T.A. et al (2020), CO2–CO2 and CO2–Ar continua at millimeter wavelengths, Journal of Quantitative Spectroscopy and Radiative Transfer, doi: 10.1016/j.jqsrt.2020.107400

Sebastian Carrasco Pro, Katia Bulekova, Brian Gregor, Adam Labadorf and Juan Ignacio Fuxman Bass (2020), Prediction of genome-wide effects of single nucleotide variants on transcription factor binding, Scientific Reports, doi: 10.1038/s41598-020-74793-4

Jason W. Rocks and Pankaj Mehta (2020), Memorizing without overfitting: Bias, variance, and interpolation in over-parameterized models, arXiv:2010.13933 [stat.ML]

Andrew K. Saydjari et al (2020), Classification of Magnetohydrodynamic Simulations using Wavelet Scattering Transforms, arXiv: 2010.11963 [astro-ph.GA]

Tamiro, Villazon; Claeys, Pieter W; Pandey Mohit; Polkovnikov Anatoli; Chandran Anushya (2020), Persistent dark states in anisotropic central spin models, Scientific Reports, doi: 10.1038/s41598-020-73015-1

Robert B. Zando, Atoallah Mesgarnejad, Chunzhou Pan, Sandra J. Shefelbine, Alain Karma, Randall M. Erb (2020), Enhanced toughness in ceramic-reinforced polymer composites with herringbone architectures, Composites Science and Technology, doi: 10.1016/j.compscitech.2020.108513

Ioana A. Zelko and Douglas P. Finkbeiner (2020), Implications of Grain Size Distribution and Composition for the Correlation Between Dust Extinction and Emissivity, arXiv:2009.11869 [astro-ph.GA] 

Ioana A. Zelko and Douglas P. Finkbeiner (2020), Impact of Dust on CMB Spectral Distortion Measurements, arXiv: 2010.06589 [astro-ph.CO] 

Do you have news about research using computing resources at the MGHPCC? If you have an interesting project that you want to tell people about or a paper you would like listed, contact


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Dusty With a Chance of Star Formation
Checking the Medicine Cabinet to Interrupt COVID-19 at the Molecular Level
Not Too Hot, Not Too Cold But Still, Is It Just Right?​
Smashing Discoveries​
Microbiome Pattern Hunting
Modeling the Air we Breathe
Exploring Phytoplankton Diversity
The Computer Will See You Now
Computing the Toll of Trapped Diamondback Terrapins
Edging Towards a Greener Future
Physics-driven Drug Discovery
Modeling Plasma-Surface Interactions
Sensing Subduction Zones
Neural Networks & Earthquakes
Small Stars, Smaller Planets, Big Computing
Data Visualization using Climate Reanalyzer
Getting to Grips with Glassy Materials
Modeling Molecular Engines
Forest Mapping: When the Budworms come to Dinner
Exploring Thermoelectric Behavior at the Nanoscale
The Trickiness of Talking to Computers
A Genomic Take on Geobiology
From Grass to Gas
Teaching Computers to Identify Odors
From Games to Brains
The Trouble with Turbulence
A New Twist
A Little Bit of This… A Little Bit of That..
Looking Like an Alien!
Locking Up Computing
Modeling Supernovae
Sound Solution
Lessons in a Virtual Test Tube​
Crack Computing
Automated Real-time Medical Imaging Analysis
Towards a Smarter Greener Grid
Heading Off Head Blight
Organic Light-Harvesting Antennae
Art and AI
Excited by Photons
Tapping into an Ocean of Data
Computing Global Change
Star Power
Engineering the Human Microbiome
Computing Social Capital
Computers Diagnosing Disease
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