November Publications

November 29, 2022

Biobased additives for asphalt applications? Cortical oxygen consumption? Inferring Behavior From Transit Origin-Destination Data? This month’s selection of publications featuring research using the MGHPCC.

Abdelhalim, A. and J. Zhao (2022), TranViT: An Integrated Vision Transformer Framework for Discrete Transit Travel Time Range Prediction, arXiv:2211.12322 [cs.CV]

Barreiro, Diego Lopez et al (2022), Biobased additives for asphalt applications produced from the hydrothermal liquefaction of sewage sludge, Engineering, doi: 10.1016/j.jece.2022.108974

Boily, M.C. et al (2022), Estimating the effect of HIV on cervical cancer elimination in South Africa: Comparative modelling of the impact of vaccination and screening, eClinicalMedicine, 10.1016/j.eclinm.2022.101754

Chen, Eric et al (2022), Redeeming Intrinsic Rewards via Constrained Optimization, arXiv:2211.07627 [cs.LG]

Fenelon, Benjamin et al (2022), A Scalable Inference Pipeline for 3D Axon Tracing Algorithms, IEEE Conference on High Performance Extreme Computing (HPEC), doi: 10.1109/HPEC55821.2022.9926403

Han, X. et al (2022), Second-Level Microgroove Convexity is Critical for Air Plastron Restoration on Immersed Hierarchical Superhydrophobic Surfaces, ACS Appl. Mater. Interfaces, doi: 10.1021/acsami.2c15929

Islam, T. et al (2022),
Factorized Parameter Estimation for Real-Time Gravitational Wave Inference, arXiv: 2210.16278 [gr-qc]

Jin, Tianyi et al (2022), Glass transition of random heteropolymers: A molecular dynamics simulation study in melt, in water, and in vacuum, Polymer, doi: 10.1016/j.polymer.2022.125503

Lai, R. and Q. Cui (2022), How to Stabilize Carbenes in Enzyme Active Sites without Metal Ions, J. Am. Chem. Soc., doi: 10.1021/jacs.2c08515

Li, Yuyu et al (2022), Graphene metasurfaces for terahertz wavefront shaping and light emission [Invited], Optical Materials Express, doi: 10.1364/OME.473110

Lozano-Duran, Adrian and H. Jane Bae (2022), Building-block-flow wall model for large-eddy simulation, arXiv:2211.07879 [physics.flu-dyn]

Lu, R.Q. et al (2022), Porous Polymers Containing Metallocalix[4]arene for the Extraction of Tobacco-Specific Nitrosamines, Chem. Mater., doi: 10.1021/acs.chemmater.2c02713

Luo, Weijun et al (2022), Deterministic Localization of Strain-induced Single-photon Emitters in Multilayer GaSe, arXiv: 2210.15726

Mächler, P. et al (2022), Baseline oxygen consumption decreases with cortical depth, PLOS Biology, doi: 10.1371/journal.pbio.3001440

McDonald, J. et al (2022), Performance Estimation for Efficient Image Segmentation Training of Weather Radar Algorithms, 2022 IEEE High Performance Extreme Computing Conference (HPEC), doi: 10.1109/HPEC55821.2022.9926400

Nobles, Mallory et al (2022), Presyndromic surveillance forimproved detection of emerging public health threats Science Advanceshttps, doi: 10.1126/sciadv.abm4920

Perez, Marku Nyevel R. et al (2022), Quantum spin Hall insulating phase and van Hove singularities in Zintl single-quintuplelayer AM2X2 (A = Ca, Sr, or Ba; M = Zn or Cd; X = Sb or Bi) family, Appl. Phys. Rev., doi: 10.1063/5.0071687

Qiu, Richard et al (2022), Deep Learning Detection and Classification of Gravitational Waves from Neutron Star-Black Hole Mergers, arXiv: 2210.15888 [astron-ph.IM]

Shankar, S. and A. Reuther (2022), Trends in Energy Estimates for Computing in AI/Machine Learning Accelerators, Supercomputers, and Compute-Intensive Applications, IEEE HPEC_Trends in Energy Estimates for Computing, arXiv: 2210.17331

Shumann, Daniela et al (2022), Inferring Mobility of Care Travel Behavior From Transit Origin-Destination Data, arXiv: 2211.04915 [stat.AP]

Siew, Peng Mun et al (2022), Space-Based Sensor Tasking Using Deep Reinforcement Learning,
The Journal of the Astronautical Sciences, doi: 10.1007/s40295-022-00354-8

Singh, Bahadur et al (2022), Topology and Symmetry in Quantum Materials, Advanced Materials, doi: 10.1002/adma.202201058

Song, Y. et al (2022), Cell invasion during competitive growth of polycrystalline solidification patterns, arXiv:2211.08500 []

Taghavi, M. and H. Mosallaei (2022), Increasing the stability margins using multi-pattern metasails and multi-modal laser beams, Nature Scientific Reports, doi: 10.1038/s41598-022-24681-w

Terzioglu, K. amd E. Ugur (2022), Cooperative Caching for Object Storage, Doctoral Dissertation, Proquest 29162332

Thompson, K.N. et al (2022), Effects of Lifetime Exposures to Environmental Contaminants on the Adult Gut Microbiome, Environ. Sci. Technol., doi: 10.1021/acs.est.2c03185

Xu, Clara et al (2022), The thesan project: Lyman-𝜶 emitter luminosity function calibration, arXiv: 2210.16275 [astro-ph.GA]

Zelko, I.A. et al (2022), The First 3 pi 3D Map of Insterstellar Dust Temperature, arXiv:2211.07667 [astro-ph.GA]


Do you have news about research using computing resources at the MGHPCC? If you have an interesting project that you want to tell people about or a paper you would like listed, contact


MGHPCC Publications

Research projects

Dusty With a Chance of Star Formation
Checking the Medicine Cabinet to Interrupt COVID-19 at the Molecular Level
Not Too Hot, Not Too Cold But Still, Is It Just Right?​
Smashing Discoveries​
Microbiome Pattern Hunting
Modeling the Air we Breathe
Exploring Phytoplankton Diversity
The Computer Will See You Now
Computing the Toll of Trapped Diamondback Terrapins
Edging Towards a Greener Future
Physics-driven Drug Discovery
Modeling Plasma-Surface Interactions
Sensing Subduction Zones
Neural Networks & Earthquakes
Small Stars, Smaller Planets, Big Computing
Data Visualization using Climate Reanalyzer
Getting to Grips with Glassy Materials
Modeling Molecular Engines
Forest Mapping: When the Budworms come to Dinner
Exploring Thermoelectric Behavior at the Nanoscale
The Trickiness of Talking to Computers
A Genomic Take on Geobiology
From Grass to Gas
Teaching Computers to Identify Odors
From Games to Brains
The Trouble with Turbulence
A New Twist
A Little Bit of This… A Little Bit of That..
Looking Like an Alien!
Locking Up Computing
Modeling Supernovae
Sound Solution
Lessons in a Virtual Test Tube​
Crack Computing
Automated Real-time Medical Imaging Analysis
Towards a Smarter Greener Grid
Heading Off Head Blight
Organic Light-Harvesting Antennae
Art and AI
Excited by Photons
Tapping into an Ocean of Data
Computing Global Change
Star Power
Engineering the Human Microbiome
Computing Social Capital
Computers Diagnosing Disease
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Outreach & Education Projects

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