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June Publications

July 1, 2019

Below is a selection of papers that appeared in June 2019 reporting the results of research using the Massachusetts Green High Performance Computing Center (MGHPCC), or acknowledging the use of Harvard's Odyssey Cluster, Northeastern's Discovery Cluster, and the Boston University Shared Computing Cluster all of which are housed at the MGHPCC.
Sylvain Capponi et al (2019), NMR relaxation in the spin-1 Heisenberg chain, arXiv: 1905.12697 [cond-mat.str-el]
A. Devarakonda, H. Inoue, S. Fang,  C. Ozsoy-Keskinbora, T. Suzuki, M. Kriener, L. Fu, E. Kaxiras, D. C. Bell, and J. G. Checkelsky (2019), Evidence for clean 2D superconductivity and field-induced finite-momentum pairing in a bulk vdW superlattice, arXiv:19809.02065 [cond-mat.supr-con]
Mingu Kang et al. (2019), Dirac fermions and flat bands in the ideal kagome metal FeSn, arXiv:1906.02167
A. Mesgarnejad, A. Karma (2019), Phase Field Modeling of Chemomechanical Fracture of Intercalation Electrodes: Role of Charging Rate and Dimensionality, arXiv:1906.07655 [cond-mat.mtrl-sci]
Pavitra Muralidhar (2019), Mating preferences of selfish sex chromosomes, Nature, doi: 10.1038/s41586-019-1271-7
Shilo Ohayon, Arik Girsault, Maisa Nasser, Shai Shen-Orr, Amit Meller (2019), Simulation of single-protein nanopore sensing shows feasibility for whole-proteome identification, PLOS Computational Biology, doi: 10.1371/journal.pcbi.1007067
Andres N. Salcedo, Benjamin D. Wibking, David H. Weinberg, Hao-Yi Wu, Douglas Ferrer, Daniel Eisenstein, and Philip Pinto (2019), Cosmology with Stacked Cluster Weak Lensing and Cluster-Galaxy Cross-Correlations, arXiv:1906.06499 [astro-ph.CO]
Hui Shao, Wenan Guo and Anders W. Sandvik (2019), Monte Carlo Renormalization Flows in the Space of Relevant and Irrelevant Operators: Application to Three-Dimensional Clock Models, arXiv: 1905.13640 [cond-mat.str-el]
Joshua Stern, Qingqing Xiong, Anthony Skjellum, and Martin C. Herbordt (2019), A Novel Approach to Supporting Communicators for In-Switch Processing of MPI Collectives
Su, Jiaying (2019), A Numerical Study of Heat Transfer in a Square Channel With and Without Bleed Holes Roughened With Staggered Square Ribs, Masters Thesis, Northeastern University
Mirac Suzgun, Sebastian Gehrmann, Yonatan Belinkov, Stuart M. Shieber (2019), LSTM Networks Can Perform Dynamic Counting, arXiv:1906.03648 [cs.CL]
Waleed Tahir, Ulugbek S. Kamilov, and Lei Tian (2019), Holographic particle localization under multiple scattering, Advanced Photonics, doi: 10.1117/1.AP.1.3.036003
Isabelle R Weir, Lu Tian, Ludovic Trinquart (2019), Multivariate meta-analysis model for the difference in restricted mean survival times, Biostatistics, doi: 10.1093/biostatistics/kxz018
Qingqing Xiong, Rushi Patel, Chen Yang, Tong Geng, Anthony Skjellum, Martin C. Herbordt (2019), GhostSZ: A Transparent FPGA-Accelerated Lossy Compression Framework
Yifan Zhang, Lorenzo Trippa, Giovanni Parmigiani (2019), Frequentist operating characteristics of Bayesian optimal designs via simulation, Statistics in Medicine, doi: 10.1002/sim.8279
Do you have news about research using computing resources at the MGHPCC? If you have an interesting project that you want to tell people about or a paper you would like listed, contact hlh@nullmit.edu

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MGHPCC Publications

Research projects

Dusty With a Chance of Star Formation
Checking the Medicine Cabinet to Interrupt COVID-19 at the Molecular Level
Not Too Hot, Not Too Cold But Still, Is It Just Right?​
Smashing Discoveries​
Microbiome Pattern Hunting
Modeling the Air we Breathe
Exploring Phytoplankton Diversity
The Computer Will See You Now
Computing the Toll of Trapped Diamondback Terrapins
Edging Towards a Greener Future
Physics-driven Drug Discovery
Modeling Plasma-Surface Interactions
Sensing Subduction Zones
Neural Networks & Earthquakes
Small Stars, Smaller Planets, Big Computing
Data Visualization using Climate Reanalyzer
Getting to Grips with Glassy Materials
Modeling Molecular Engines
Forest Mapping: When the Budworms come to Dinner
Exploring Thermoelectric Behavior at the Nanoscale
The Trickiness of Talking to Computers
A Genomic Take on Geobiology
From Grass to Gas
Teaching Computers to Identify Odors
From Games to Brains
The Trouble with Turbulence
A New Twist
A Little Bit of This... A Little Bit of That..
Looking Like an Alien!
Locking Up Computing
Modeling Supernovae
Sound Solution
Lessons in a Virtual Test Tube​
Higgs Boson Spotted in Holyoke?
Crack Computing
Automated Real-time Medical Imaging Analysis
Towards a Smarter Greener Grid
Heading Off Head Blight
Organic Light-Harvesting Antennae
Art and AI
Excited by Photons
Tapping into an Ocean of Data
Computing Global Change
Star Power
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Outreach & Education Projects

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