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June 2025 Publications

July 16, 2025

Superconducting Qubits? Ethnicity-Specific Recessive Loci? Fabrication of hydroxylated norbornene foams? A selection of recent publications featuring research using the MGHPCC.

Beneveds, Sean and Jesse Thaler (2025), Frequentist Uncertainties on Neural Density Ratios with wifi Ensembles, arXiv: 2506.00113 [hep-ph] 

de Medeiros, B.A.S., Cai, L., Flynn, P.J. et al (2025), A composite universal DNA signature for the tree of life, Nat Ecol Evol, doi: 10.1038/s41559-025-02752-1

Ge, Beverly et al (2025), Decision tools for schools using continuous indoor air quality monitors: a case study of CO2 in Boston Public Schools, The Lancet Regional Health - Americas, doi: 10.1016/j.lana.2025.101148

Holman, Matthew J. et al (2025), A Pan-STARRS Search for Distant Planets: Part 1, arXiv: 2506.02144 [astro-ph.EP] 

Kline, Jeremy B. et al (2025), The Arm Qubit: A Superconducting Qubit Co-Designed for Coherence and Coupling, arXiv: 2506.05315 [quant-ph] 

Kurlander, Jacob A. et al (2025), Predictions of the LSST Solar System Yield: Near-Earth Objects, Main Belt Asteroids, Jupiter Trojans, and Trans-Neptunian Objects, arXiv: 2506.02487 [astro-ph.EP]  

Lee, Sanghun et al (2025), Uncovering Ethnicity-Specific Recessive Loci for Alzheimer's Disease in 89 Dominican Families Using Family-Based WGS Analysis, Genetic Epidemiology, doi: 10.1002/gepi.70014

Mallard, William (2025), FtsZ Phosphorylation Modulates Tail-Core Binding to Tune Cell Division in Bacillus subtilis, Harvard University ProQuest Dissertations & Theses 

Martinez, M. Pilar Botana et al (2025), Rethinking heat in thousands of school classrooms through continuous monitoring and novel exposure metrics, Indoor Environments, doi: 10.1016/j.indenv.2025.100105

McDonough, Bryanne et al (2025), Measuring Scaling Relations: Fitting Technique Matters, The Astrophysical Journal Letters, doi: 10.3847/2041-8213/ade13c 

Mondal, Soubhik and Ksenia B. Bravaya (2025), Analytic Nuclear Gradients for Complex Potential Energy Surfaces: A Projected CAP Approach, doi: 10.1021/acs.jctc.5c00418 

Niraula, Prajwal et al (2025), The Detection-vs-Retrieval Challenge: Titan as an Exoplanet, arXiv: 2506.12144 [astro-ph.EP] 

Pulkkinen, Aki et al (2025), Probing the Semiconductor-to-Dirac Semimetal Transition in Na–Sb–Bi Alloys with x-ray Compton Scattering, arXiv: 2506.02833 [cond-mat.mtrl-sci]  

Russo, Alessio et al (2025), Learning to Explore: An In-Context Learning Approach for Pure Exploration, arXiv: 2506.01876 [cs.LG] 

Sharp, Edith A. et al (2025), Role of the SAF-A/HNRNPU SAP domain in X chromosome inactivation, nuclear dynamics, transcription, splicing, and cell proliferation, PLOS Genetics, doi: 10.1371/journal.pgen.1011719

Suar, Sidant Kumar and Sarah C. Millholland (2025), Planetary Obliquity Excitation Through Pre-Main Sequence Stellar Evolution, arXiv: 2506.17843 [astro-ph.EP] 

Utkarsh et al (2025), Physics-Constrained Flow Matching: Sampling Generative Models with Hard Constraints, arXiv: 2506.04171 [cs.LG] 

Vogler, Andrew et al (2025), Fabrication of hydroxylated norbornene foams via frontal polymerization for catalytic applications, RSC Adv, doi: 10.1039/D5RA01510C 

Weile, Mads et al (2025), Defect Complexes in CrSBr Revealed Through Electron Microscopy and Deep Learning, Physical Review X, doi: 10.1103/PhysRevX.15.021080 

Zhu, Jiabei (2025), Advancing intensity diffraction tomography with multiple scattering models in transmission and reflection systems, BU doctoral dissertation,  

Do you have news about research using computing resources at the MGHPCC? If you have an interesting project that you want to tell people about or a paper you would like listed, contact 

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MGHPCC Publications

Research projects

A Future of Unmanned Aerial Vehicles
Yale Budget Lab
Volcanic Eruptions Impact on Stratospheric Chemistry & Ozone
The Rhode Island Coastal Hazards Analysis, Modeling, and Prediction System
Towards a Whole Brain Cellular Atlas
Tornado Path Detection
The Kempner Institute - Unlocking Intelligence
The Institute for Experiential AI
Taming the Energy Appetite of AI Models
Surface Behavior
Studying Highly Efficient Biological Solar Energy Systems
Software for Unreliable Quantum Computers
Simulating Large Biomolecular Assemblies
SEQer - Sequence Evaluation in Realtime
Revolutionizing Materials Design with Computational Modeling
Remote Sensing of Earth Systems
QuEra at the MGHPCC
Quantum Computing in Renewable Energy Development
Pulling Back the Quantum Curtain on ‘Weyl Fermions’
New Insights on Binary Black Holes
NeuraChip
Network Attached FPGAs in the OCT
Monte Carlo eXtreme (MCX) - a Physically-Accurate Photon Simulator
Modeling Hydrogels and Elastomers
Modeling Breast Cancer Spread
Measuring Neutrino Mass
Investigating Mantle Flow Through Analyses of Earthquake Wave Propagation
Impact of Marine Heatwaves on Coral Diversity
IceCube: Hunting Neutrinos
Genome Forecasting
Global Consequences of Warming-Induced Arctic River Changes
Fuzzing the Linux Kernel
Exact Gravitational Lensing by Rotating Black Holes
Evolution of Viral Infectious Disease
Evaluating Health Benefits of Stricter US Air Quality Standards
Ephemeral Stream Water Contributions to US Drainage Networks
Energy Transport and Ultrafast Spectroscopy Lab
Electron Heating in Kinetic-Alfvén-Wave Turbulence
Discovering Evolution’s Master Switches
Dexterous Robotic Hands
Developing Advanced Materials for a Sustainable Energy Future
Detecting Protein Concentrations in Assays
Denser Environments Cultivate Larger Galaxies
Deciphering Alzheimer's Disease
Dancing Frog Genomes
Cyber-Physical Communication Network Security
Avoiding Smash Hits
Analyzing the Gut Microbiome
Adaptive Deep Learning Systems Towards Edge Intelligence
Accelerating Rendering Power
ACAS X: A Family of Next-Generation Collision Avoidance Systems
Neurocognition at the Wu Tsai Institute, Yale
Computational Modeling of Biological Systems
Computational Molecular Ecology
Social Capital and Economic Mobility
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