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August Publications

September 1, 2020

Below is a selection of papers that appeared in May 2020  reporting the results of research using the Massachusetts Green High Performance Computing Center (MGHPCC), or acknowledging the use of Harvard’s Odyssey or Cannon Clusters, Northeastern’s Discovery Cluster, the Boston University Shared Computing Cluster and MIT's Engaging Cluster all of which are housed at the MGHPCC.

Christopher C.M. Baker, Jessica A. Castillo Vardaro, Daniel F. Doak, Johan Pansu, Jérémy Puissant, Robert M. Pringle, Corina E. Tarnita (2020), Spatial patterning of soil microbial communities created by fungus‐farming termites, Molecular Ecology, doi: 10.1111/mec.15585
Tiffany Barnes, Jamie Payton, Nicki Washington, Felesia Stukes, Alan Peterfreund, Sarah Dunton (2020), Featured Research on Equity and Sustained Participation in Engineering, Computing, and Technology, Computing in Science and Engineering, doi: 10.1109/MCSE.2020.3010595
Bodhisatwa Biswas, Seung Gyou Baek, Paul T Bonoli, Syun'ichi Shiraiwa, Greg M Wallace and Anne E White (2020), Study of turbulence-induced refraction of Lower Hybrid waves using synthetic scrape-off layer filaments, Plasma Physics and Controlled Fusion, doi: 10.1088/1361-6587/abb0d5
Paul Z. Hanakata, Ekin D. Cubuk, David K. Campbell, and Harold S. Park (2020), Forward and Inverse Design of Kirigami via Supervised Autoencoder, arXiv:2008.05298 [cond-mat.mtrl-sci]
A.P. Hurford, J.J. Harou, L. Bonzanigo, P.A. Ray, P. Karki, L. Bharati, P. Chinnasamy (2020), Efficient and robust hydropower system design under uncertainty - A demonstration in Nepal, Renewable and Sustainable Energy Reviews, doi: 10.1016/j.rser.2020.109910
Hussain Ismat, Karim (2020), Cardiorespiratory Fitness and Virtual Navigation in Healthy Older Adults, Boston University Doctoral Dissertation, https://search.proquest.com/openview/9977101002865b899b724f70829b0f53
Benjamin D. Johnsson et al (2020), A Diffuse Metal-Poor Component of the Sagittarius Stream Revealed by the H3 Survey, arXiv:2007.14408, [astro-ph.GA]
Jou, Christine (2020.), Connecting Language Representations in
Humans and Machines, Bachelor's thesis, Harvard College, https://nrs.harvard.edu/URN-3:HUL.INSTREPOS:37364734

Malcolm N. Mistry (2020), A High Spatiotemporal Resolution Global Gridded Dataset of Historical Human Discomfort Indices, Atmosphere, doi: 10.3390/atmos11080835
M. Mohebujjaman et al (2020), Scalability Analysis of Direct and Iterative Solvers Used to Model Charging of Non-insulated Superconducting Pancake Solenoids, arXiv: 2007.15410 [physics.comp-ph],
T. Odstrčil, N. T. Howard,  F. Sciortino,  C. Chrystal, C. Holland,  E. Hollmann,  G. McKee,  K. E. Thome, and  T. M. Wilks (2020), Dependence of the impurity transport on the dominant turbulent regime in ELM-y H-mode discharges on the DIII-D tokamak, Physics of Plasmas, doi: 10.1063/5.0010725
Monica Pengshung, Jingbai Li, Fatemah Mukadum, Steven A. Lopez, and Ellen M. Sletten(2020), Photophysical Tuning of Shortwave Infrared Flavylium Heptamethine Dyes via Substituent Placement, ACS Organic (Chemistry) Letters, doi: 10.1021/acs.orglett.0c02213
Rami V. Tabri and Christopher D. Walker (2020), Inference for Moment Inequalities: A Constrained Moment Selection Procedure, arXiv:  2008.09021 [econ.EM]
Pim van der Hoorn, William J. Cunningham, Gabor Lippner, Carlo Trugenberger, and Dmitri Krioukov (2020), Ollivier-Ricci curvature convergence in random geometric graphs, arXiv: 2008.01209 [math.PR]
Dorien Villafranco, Ankush Gupta, Emily Ryan, R. Glynn Holt, Sheryl M. Grace (2020), An Assessment of Homogeneous Mixture Method Cavitation Models in Predicting Cavitation in Nozzle Flow, Journal of Fluids Engineering, doi: 10.1115/1.4048287
V, Ashley Villar et al (2020), SuperRAENN: A Semi-supervised Supernova Photometric Classification Pipeline Trained on Pan-STARRS1 Medium Deep Survey Supernovae, arXiv: 2008.04921 [astro-ph.HE]
Krissia Zawadzki, Luhang Yang, and Adrian E. Feiguin (2020), Beyond perturbation theory: A time-dependent approach to inelastic scattering spectroscopies in- and away from equilibrium, arXiv: 2008.09709 [cond-mat-str-el]
Do you have news about research using computing resources at the MGHPCC? If you have an interesting project that you want to tell people about or a paper you would like listed, contact hlh@mit.edu

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MGHPCC Publications

Research projects

Dusty With a Chance of Star Formation
Checking the Medicine Cabinet to Interrupt COVID-19 at the Molecular Level
Not Too Hot, Not Too Cold But Still, Is It Just Right?​
Smashing Discoveries​
Microbiome Pattern Hunting
Modeling the Air we Breathe
Exploring Phytoplankton Diversity
The Computer Will See You Now
Computing the Toll of Trapped Diamondback Terrapins
Edging Towards a Greener Future
Physics-driven Drug Discovery
Modeling Plasma-Surface Interactions
Sensing Subduction Zones
Neural Networks & Earthquakes
Small Stars, Smaller Planets, Big Computing
Data Visualization using Climate Reanalyzer
Getting to Grips with Glassy Materials
Modeling Molecular Engines
Forest Mapping: When the Budworms come to Dinner
Exploring Thermoelectric Behavior at the Nanoscale
The Trickiness of Talking to Computers
A Genomic Take on Geobiology
From Grass to Gas
Teaching Computers to Identify Odors
From Games to Brains
The Trouble with Turbulence
A New Twist
A Little Bit of This... A Little Bit of That..
Looking Like an Alien!
Locking Up Computing
Modeling Supernovae
Sound Solution
Lessons in a Virtual Test Tube​
Higgs Boson Spotted in Holyoke?
Crack Computing
Automated Real-time Medical Imaging Analysis
Towards a Smarter Greener Grid
Heading Off Head Blight
Organic Light-Harvesting Antennae
Art and AI
Excited by Photons
Tapping into an Ocean of Data
All Research Projects

Collaborative projects

ALL Collaborative PROJECTS

Outreach & Education Projects

ALL OUTREACH & Education PROJECTS
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