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September Publications

October 6, 2020

Primordial Gravitational Waves; Evidence for the Pleistocene Arc Hypothesis; Spindle Dynamic in Nematode Evolution - Intrigued?  Read about these and more in our selection of September publications from the MGHPCC.
Below is a selection of papers that appeared in May 2020  reporting the results of research using the Massachusetts Green High Performance Computing Center (MGHPCC), or acknowledging the use of Harvard’s Odyssey or Cannon Clusters, Northeastern’s Discovery Cluster, the Boston University Shared Computing Cluster, and MIT’s Engaging Cluster all of which are housed at the MGHPCC.
Jonathan Carifio (2020), Examining the String Landscape Using Data Science and Network Techniques, Northeastern University Doctoral Dissertation
The CMB-S4 Collaboration: Krevork Abazaian et al (2020), CMB-S4: Forecasting Constraints on Primordial Gravitational Waves, arXiv:2008.12619 [astro-ph.CO]
Eamon C. Corbett, Gustavo A. Bravo, Fabio Schunck, Luciano N. Naka, Luís F. Silveira, Scott V. Edwards (2020), Evidence for the Pleistocene Arc Hypothesis from genome‐wide SNPs in a Neotropical dry forest specialist, the Rufous‐fronted Thornbird (Furnariidae: Phacellodomus rufifrons), Molecular Ecology, doi: 10.1111/mec.15640
Kaustav K. Das, Catherine Zucker, Joshua S. Speagle, Alyssa Goodman, Gregory M. Green, and João Alves (2020), Constraining the Distance to the North Polar Spur with Gaia DR2, arXiv:2009.01320 [astro-ph.GA]
Reza Farhadifar, Che-Hang Yu, Gunar Fabig, Hai-Yin Wu, David B Stein, Matthew Rockman, Thomas Mueller-Reichert, Michael J Shelley, Daniel J Needleman (2020), Stoichiometric interactions explain spindle dynamics and scaling across 100 million years of nematode evolution, eLife, doi: 10.7554/eLife.55877
Jafarzanjani, Samad (2020), Numerical Modeling and Design Optimization of Metamaterials, Northeastern University Doctoral Dissertation
Justine Kozubal, Tristan Heck, and Ricardo B. Metz (2020), Vibrational Spectroscopy of Intermediates and C–H Activation Products of Sequential Zr+ Reactions with CH4, J. Phys. Chem. A, doi: 10.1021/acs.jpca.0c07027
Jingbai Li and Steven A Lopez (2020), Multiconfigurational Calculations and Non-Adiabatic Molecular Dynamics Explain Tricyclooctadiene Photochemical Chemoselectivity, J. Phys. Chem. A, doi: 10.1021/acs.jpca.0c05280
Dongyue Liang, Udaya Dahal, Meng Wu, Catherine J. Murphy, and Qiang Cui (2020), Ligand Length and Surface Curvature Modulate Nanoparticle Surface Heterogeneity and Electrostatics, J. Phys. Chem. C, doi: 10.1021/acs.jpcc.0c08387
A. Mathews, M. Francisquez, J.W. Hughes, and D.R. Hatch (2020), Uncovering edge plasma dynamics via deep learning from partial observations, arXiv:2009.05005 [physics.plasm-ph]
Jorge Moreno, Paul Torrey, Sara L. Ellison, David R. Patton, Connor Bottrell, Asa F. L. Bluck, Maan H. Hani, Christopher C. Hayward, James S. Bullock, Philip F. Hopkins, and Lars Hernquist (2020), Spatially resolved star formation and fuelling in galaxy interactions, arXiv:2009.11289 [astro-ph.GA]
Pranay Patil, Hui Shao, and Anders W. Sandvik (2020), Anomalous U(1) to Zq cross-over in quantum and classical q-state clock models, arXiv:2009.03249 [cond-mat.str-el]
Jason W. Rocks and Pankaj Mehta (2020), Memorizing without overfitting: Bias, variance, and interpolation in over-parameterized models, arXiv:2010.13933 [stat.ML]
Andrew K. Saydjari et al (2020), Classification of Magnetohydrodynamic Simulations using Wavelet Scattering Transforms, arXiv: 2010.11963 [astro-ph.GA]
Do you have news about research using computing resources at the MGHPCC? If you have an interesting project that you want to tell people about or a paper you would like listed, contact 

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A Future of Unmanned Aerial Vehicles
Yale Budget Lab
Volcanic Eruptions Impact on Stratospheric Chemistry & Ozone
Towards a Whole Brain Cellular Atlas
Tornado Path Detection
The Kempner Institute - Unlocking Intelligence
The Institute for Experiential AI
Taming the Energy Appetite of AI Models
Surface Behavior
Studying Highly Efficient Biological Solar Energy Systems
Software for Unreliable Quantum Computers
Simulating Large Biomolecular Assemblies
SEQer - Sequence Evaluation in Realtime
Revolutionizing Materials Design with Computational Modeling
Remote Sensing of Earth Systems
Quantum Computing in Renewable Energy Development
Pulling Back the Quantum Curtain on ‘Weyl Fermions’
New Insights on Binary Black Holes
NeuraChip
Network Attached FPGAs in the OCT
Monte Carlo eXtreme (MCX) - a Physically-Accurate Photon Simulator
Modeling Hydrogels and Elastomers
Modeling Breast Cancer Spread
Impact of Marine Heatwaves on Coral Diversity
IceCube: Hunting Neutrinos
Genome Forecasting
Global Consequences of Warming-Induced Arctic River Changes
Exact Gravitational Lensing by Rotating Black Holes
Evolution of Viral Infectious Disease
Evaluating Health Benefits of Stricter US Air Quality Standards
Ephemeral Stream Water Contributions to US Drainage Networks
Energy Transport and Ultrafast Spectroscopy Lab
Electron Heating in Kinetic-Alfvén-Wave Turbulence
Discovering Evolution’s Master Switches
Dexterous Robotic Hands
Developing Advanced Materials for a Sustainable Energy Future
Detecting Protein Concentrations in Assays
Denser Environments Cultivate Larger Galaxies
Deciphering Alzheimer's Disease
Dancing Frog Genomes
Cyber-Physical Communication Network Security
Asteroid Data Mining
Analyzing the Gut Microbiome
Adaptive Deep Learning Systems Towards Edge Intelligence
Accelerating Rendering Power
ACAS X: A Family of Next-Generation Collision Avoidance Systems
Neurocognition at the Wu Tsai Institute, Yale
Computational Modeling of Biological Systems
Computational Molecular Ecology
Social Capital and Economic Mobility
Building for Floods
Better Pathogen Targeting
Tracking Environmental Health Risks
AI for Cancer Diagnosis
Microplastic-Free by Design
Supporting Data-intensive Social Science
Sailing the Symbiosis Seascape
Wrangle Range Modeling
Shining a Light on Dark Matter
Grid Responsive Data Centers
Multifunctional 3D-Printed Materials
AI Pareidolia
Computing Hidden Health Threats from Heat
Staving off the Banana Apocalypse
CRISPR Mice, Smarter Science
Naval and Ocean Renewable Energy Hydrodynamics
AI That Speaks Human About Health
A Safer Way to See Inside Cells
How Monkeys - and Machines - See in 3D
FlowER: AI for Predicting Chemical Reactions
Bone Ratios and Big Data
Supercomputers Reveal Ancient Atmospheric Battle
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