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June 2024 Publications

June 6, 2024

Adversarially-robust representation learning? Benefits of school buses? Triple-dearomative photocycloaddition?? A selection of recent publications featuring research using the MGHPCC.

Arnold, Julian et al (2024), Phase Transitions in the Output Distribution of Large Language Models, arXiv: 2405.17088 [cs.LG] 

Bagherian, Hengameh et al (2024), Stepping into the Forest: Confronting Interacting Radiation Models for the Hubble Tension with Lyman-α Data, arXiv: 2405.17554 [astro-ph.CO] 

Beldon, Blaket et al (2024), Infinite Limits of Multi-head Transformer Dynamics, arXiv: 2405.15712 [stat.ML] 

Benjamin, Stuart Royce Sands et al (2024), Macroscopic trends of linear tearing stability in cylindrical current profiles, IOPScince Plasma Physics and Controlled Fusion, doi: 10.1088/1361-6587/ad4e68 

Castrillón-Candás, J.E. (2024), Spatial best linear unbiased prediction: a computational mathematics approach for high dimensional massive datasets, Adv Comput Math, doi: 10.1007/s10444-024-10132-9

Choma, Ernani F. et al (2024), Adopting electric school buses in the United States: Health and climate benefits, PNAS, doi: 10.1073/pnas.2320338121 

Edwards, Scott V. et al (2024), A nuclear genome assembly of an extinct flightless bird, the little bush moa, Science Advances, doi: 10.1126/sciadv.adj6823

Faggoli, Guglielmo et al (2024), Testing eccentric corrections to the radiation-reaction force in the test-mass limit of effective-one-body models, arXiv: 2405.19006 [gr-qc]  

Gray, Dodd et al (2024) Inverse Design for Waveguide Dispersion with a Differentiable Mode Solver arXiv: 2405.10901 [physics.optics] 

Gupta, Sharut et al (2024), In-Context Symmetries: Self-Supervised Learning through Contextual World Models, arXiv: 2405.18193 [cs.LG] 

Han, Seungwook et al (2024), Value Augmented Sampling for Language Model Alignment and Personalization, arXiv: 2405.06639 [cs.LG]  

Hod, Shlomi et al (2024), Differentially Private Release of Israel’s National Registry of Live Births, arXiv: 2405.00267 [cs.CR] 

Ji, Kaijie et al (2024), Triple-Dearomative Photocycloaddition: A Strategy to Construct Caged Molecular Frameworks, J. Am. Chem. Soc., doi: 10.1021/jacs.4c02674 

Kim, Hyeongjin and Anatoli Polkovnikov (2024), Integrability as an attractor of adiabatic flows, Physical Review B, doi: 10.1103/PhysRevB.109.195162

Jung, Inkee and Siu-Cheong Lau (2024), A Logifold Structure on Measure Spaces, arXiv: 2405.05492 [math.DG] 

Martınez-Sanchez, Alvaro et al (2024), Decomposing causality into its synergistic, unique, and redundant components, arXiv: 2405.12411 [physics.data-an] 

Matzelle, M. et al (2024), Recycling failed photoelectrons via tertiary photoemission, arXiv: 2405.06141 

McDonald, Matthew A. et al (2024), Calibration-free reaction yield quantification by HPLC with a machine-learning model of extinction coefficients, Chem. Sci., doi: 10.1039/D4SC01881H 

Melcer, Daniel et al (2024), Shield Decentralization for Safe Reinforcement Learning in General Partially Observable Multi-Agent Environments, AAMAS ’24: Proceedings of the 23rd International Conference on Autonomous Agents and Multiagent Systems, doi: 10.5555/3635637.3663168

Osadchey Brown, Reilly et al (2024), Complete Computational Reaction Mechanism for Foldamer-Catalyzed Aldol Condensation, ACS Catal., doi: 10.1021/acscatal.4c00937

Pizzochero, Michele et al (2024), One-Dimensional Magnetic Conduction Channels across Zigzag Graphene Nanoribbon/Hexagonal Boron Nitride Heterojunctions, Nano Letters, doi: 10.1021/acs.nanolett.4c00920

Portela, Tifanny et al (2024), Learning Force Control for Legged Manipulation, arXiv:2405.01402 [cs.RO] 

Sargurupremraj, Muralidharan et al (2024), Genetic Complexities of Cerebral Small Vessel Disease, Blood Pressure, and Dementia, JAMA Network Open, doi: 10.1001/jamanetworkopen.2024.12824

Sato, Shoyo et al (2024), An ultraconserved element probe set for velvet worms (Onychophora), Molecular Phylogenetics and Evolution, doi: 10.1016/j.ympev.2024.108115

Yang, Sheng et al (2024), Spectral regularization for adversarially-robust representation learning, arXiv: 2405.17181 cs.LG] 

Yang, Zhiyuan et al (2024), Next-Gen Remote Airport Maintenance: UAV-Guided Inspection and Maintenance Using Computer Vision, Drones, doi: 10.3390/drones8060225

Zarch, R. et al (2024), From Data Bonk to Data Wonk: The Value of Collaborative Exploration of State-based Data Systems in Support of Equitable Computer Science Education Policy, Programs and Practices, RESPECT 2024: Proceedings of the 2024 on RESPECT Annual ConferenceMay, doi: 10.1145/3653666.3656085

Zheng JW et al (2024), pKa Prediction in Non-Aqueous Solvents, ChemRxiv. 2024, doi: 10.26434/chemrxiv-2024-vx797-v2

Zier, Oliver et al (2024), Adapting arepo-rt for Exascale Computing: GPU Acceleration and Efficient Communication, arXiv:2404.17630 [astro-ph.IM] 

Do you have news about research using computing resources at the MGHPCC? If you have an interesting project that you want to tell people about or a paper you would like listed, contact hlh@nullmit.edu

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MGHPCC Publications

Research projects

Foldit
Dusty With a Chance of Star Formation
Checking the Medicine Cabinet to Interrupt COVID-19 at the Molecular Level
Not Too Hot, Not Too Cold But Still, Is It Just Right?​
Smashing Discoveries​
Microbiome Pattern Hunting
Modeling the Air we Breathe
Exploring Phytoplankton Diversity
The Computer Will See You Now
Computing the Toll of Trapped Diamondback Terrapins
Edging Towards a Greener Future
Physics-driven Drug Discovery
Modeling Plasma-Surface Interactions
Sensing Subduction Zones
Neural Networks & Earthquakes
Small Stars, Smaller Planets, Big Computing
Data Visualization using Climate Reanalyzer
Getting to Grips with Glassy Materials
Modeling Molecular Engines
Forest Mapping: When the Budworms come to Dinner
Exploring Thermoelectric Behavior at the Nanoscale
The Trickiness of Talking to Computers
A Genomic Take on Geobiology
From Grass to Gas
Teaching Computers to Identify Odors
From Games to Brains
The Trouble with Turbulence
A New Twist
A Little Bit of This… A Little Bit of That..
Looking Like an Alien!
Locking Up Computing
Modeling Supernovae
Sound Solution
Lessons in a Virtual Test Tube​
Crack Computing
Automated Real-time Medical Imaging Analysis
Towards a Smarter Greener Grid
Heading Off Head Blight
Organic Light-Harvesting Antennae
Art and AI
Excited by Photons
Tapping into an Ocean of Data
Computing Global Change
Star Power
Engineering the Human Microbiome
Computing Social Capital
Computers Diagnosing Disease
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