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July Publications

August 5, 2020

Below is a selection of papers that appeared in May 2020  reporting the results of research using the Massachusetts Green High Performance Computing Center (MGHPCC), or acknowledging the use of Harvard’s Odyssey or Cannon Clusters, Northeastern’s Discovery Cluster, the Boston University Shared Computing Cluster and MIT's Engaging Cluster all of which are housed at the MGHPCC.

Mark Baum Robin Wordsworth (2020), Groundwater Flow to Gale Crater in an Episodically Warm Climate, Journal of Geophysical Research Planets, doi: 10.1029/2020JE006397
M.-A. C. Bind, and D. B. Rubin (2020), When possible, report a Fisher-exact P value and display its underlying null randomization distribution, PNAS, doi: 10.1073/pnas.1915454117
Zhao Bowen, Takahashi Jun, Sandvik Anders W., (2020), Tunable deconfined quantum criticality and interplay of different valence-bond solid phases, Chinese Physics B, 2020, 29(5): 057506, http://cpb.iphy.ac.cn/article/2020/2030/cpb_29_5_057506.html
Lior M. Burko and Gaurav Khanna (2020), Climbing up the memory staircase: Equatorial zoom-whirl orbits, arXiv: 2007.1254 [gr-qc]
Anderson S. Chaves, Alex Antonelli, Daniel T. Larson, and Efthimios Kaxiras (2020), Boosting the efficiency of ab initio electron-phonon coupling calculations through dual interpolation, arXiv: 2006.16954 [cond-mat.mtr-sci]
Ethan Evans (2020), Conformational Landscape Reduction of a Dynamic 29-Residue Peptide by a Perfluoroaromatic Small Molecule, ChemRXiv, doi: 10.25434/chemrxiv.12679226.v1
Zhaoqianqi Feng, Huaimin Wang, Fengbin Wang, Younghoon Oh, Cristina Berciu, Qiang Cui, Edward H. Egelman, BingXu (2020), Artificial Intracellular Filaments, Cell Reports Physical Science, doi: 10.1016/j.xcrp.2020.100085
Gregory M. Green, Hans-Walter Rix, Leon Tschesche, Douglas Finkbeiner, Catherine Zucker, Edward F. Schlafly, Jan Rybizki, Morgan Fouesneau, Rene Andrae and Joshua Speagle (2020), Data-Driven Stellar Models, arXiv: 2006.16258 [astro-ph.GA]
Shingo Ito and Qiang Cui (2020), Multi-level free energy simulation with a staged transformation approach, The Journal of Chemical Physics, doi: 10.1063/5.0012494
Harshil Kamdar, Charlie Conroy, Yuan-Sen Ting, Kareem El-Brady (2020), Spatial and Kinematic Clustering of Stars in the Galactic Disk, arXiv: 2007.10990 [astro-ph.GA]
Weijun Luo, Akinola D. Oyedele, Yiyi Gu, Tianshu Li, Xingzhi Wang, Amanda V. Haglund, David Mandrus, Alexander A. Puretzky, Kai Xiao, Liangbo Liang, Xi Ling (2020), Anisotropic Phonon Response of Few‐Layer PdSe2 under Uniaxial Strain, Advanced Functional Materials, doi: 10.1002/adfm.202003215
Mahdieh Yazdani, Guohui Zhang, Zhiguang Jia, Jingyi Shi, Jianmin Cui Is a corresponding author, Jianhan Chen (2020), Aromatic interactions with membrane modulate human BK channel activation, eLife 2020;9:e55571, doi: 10.7554/eLife.55571
Do you have news about research using computing resources at the MGHPCC? If you have an interesting project that you want to tell people about or a paper you would like listed, contact hlh@mit.edu

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MGHPCC Publications

Research projects

Dusty With a Chance of Star Formation
Checking the Medicine Cabinet to Interrupt COVID-19 at the Molecular Level
Not Too Hot, Not Too Cold But Still, Is It Just Right?​
Smashing Discoveries​
Microbiome Pattern Hunting
Modeling the Air we Breathe
Exploring Phytoplankton Diversity
The Computer Will See You Now
Computing the Toll of Trapped Diamondback Terrapins
Edging Towards a Greener Future
Physics-driven Drug Discovery
Modeling Plasma-Surface Interactions
Sensing Subduction Zones
Neural Networks & Earthquakes
Small Stars, Smaller Planets, Big Computing
Data Visualization using Climate Reanalyzer
Getting to Grips with Glassy Materials
Modeling Molecular Engines
Forest Mapping: When the Budworms come to Dinner
Exploring Thermoelectric Behavior at the Nanoscale
The Trickiness of Talking to Computers
A Genomic Take on Geobiology
From Grass to Gas
Teaching Computers to Identify Odors
From Games to Brains
The Trouble with Turbulence
A New Twist
A Little Bit of This... A Little Bit of That..
Looking Like an Alien!
Locking Up Computing
Modeling Supernovae
Sound Solution
Lessons in a Virtual Test Tube​
Higgs Boson Spotted in Holyoke?
Crack Computing
Automated Real-time Medical Imaging Analysis
Towards a Smarter Greener Grid
Heading Off Head Blight
Organic Light-Harvesting Antennae
Art and AI
Excited by Photons
Tapping into an Ocean of Data
All Research Projects

Collaborative projects

ALL Collaborative PROJECTS

Outreach & Education Projects

ALL OUTREACH & Education PROJECTS
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