January 2023 Publications

January 31, 2023

Aviation lightning prevention? ​Numerical-relativity-informed perturbation
theory​?​ Probabilistic genotype-phenotype mapping?
This month's selection of publications featuring research using the MGHPCC.

Chen, Zhao and Nan Wang (2023), Learning dynamics from coarse/noisy data with scalable symbolic regression, Mechanical Systems and Signal Processing, doi: 10.1016/j.ymssp.2023.110147

Cone, Cooper et al (2023), Deep Reinforcement Learning Reward Model Parameter Optimization with Surrogate Modelling, Aerospace Research Central, doi: 10.2514/6.2023-2155

Dougherty, Maureen et al (2022), The ERN Cryo-EM Federated Instrument Pilot Project: Phase 1,
IEEE 2022 4th Annual Workshop on Extreme-scale Experiment-in-the-Loop Computing (XLOOP), 
doi: 10.1109/XLOOP56614.2022.00009

Fernandez, John E. et al (2023), Comparison of F-76 and JP-8 Fuel Surrogates in a Low-Pressure Swirl Burner, Aerospace Research Center, doi: 10.2514/6.2023-0782

Guerra-Garcia, Carmen et al (2023), Addressing the Lightning Protection Needs of Novel Aircraft, Aerospace Research Central, doi: 10.2514/6.2023-2618

Husseini, Jamal et al (2023), Generation of 2-D Fiber Reinforced Composite Microstructures with Statistically Equivalent Features Using Machine Learning and Adaptive Data Generation, Aerospace Research Center, doi: 10.2514/6.2023-1267

Islam, Jousif et al (2023), Remnant black hole properties from numerical-relativity-informed perturbation theory and implications for waveform modelling, arXiv: 2301.07251 [gr-qc]

Islam, Rajibul et al (2022), Switchable large-gap quantum spin Hall state in the two-dimensional MSi2Z4 class of materials, Physical Review B, doi: 10.1103/PhysRevB.106.245149

Jain, Aastha et al (2023), Regulation of Ebola GP conformation and membrane binding by the chemical environment of the late endosome, biorXiv, doi: 10.1101/2023.01.18.524651

Lee, Sanghun et al (2023), A comparison between similarity matrices for principal component analysis to assess population stratification in sequenced genetic data sets Get access Arrow, Briefings on Bioinformatics, doi: 10.1093/bib/bbac611

Matlock, Alex et al (2023), Multiple-scattering simulator-trained neural network for intensity diffraction tomography, Optics Express, doi: 10.1364/OE.477396

Mazzola, Frederico et al (2023), Discovery of a Magnetic Dirac System with a Large Intrinsic Nonlinear Hall Effect, Nano. Lett., doi: 10.1021/acs.nanolett.2c04194

Milstein, Adam B et al (2023), Detail Enhancement of AIRS/AMSU Temperature and Moisture Profiles Using a 3D Deep Neural Network, Artificial Intelligence for the Earth Systems, doi: 10.1175/AIES-D-22-0037.1

Pavan, Colin A. et al (2023), Modeling Flame Speed Modification by Nanosecond Pulsed Discharges to Inform Experimental Design, Aerospace Research Center, doi: 10.2514/6.2023-2056

Podolak, M. et al (2023), An equation of state of CO for use in planetary modeling, Icarus, doi: 10.1016/j.icarus.2023.115424

Sappington, Anna and Vaibhav Mohanty (2023), Probabilistic Genotype-Phenotype Maps Reveal Mutational Robustness of RNA Folding, Spin Glasses, and Quantum Circuits, arXiv: 2301.01847 [cond-mat.stat-mech]

Schiefelbein, M.C. et al (2023), Automated Contact Tracing Assessment, LL Technical Report 

Starko, S. et al (2023), Marine heatwaves threaten cryptic coral diversity and erode 2 associations amongst coevolving partners, bioRxiv, doi: 10.1101/2023.01.07.522953

Teng, Yanting et al (2023), Classifying topological neural network quantum states via diffusion maps, 
arXiv: 2301.02683 [quant-ph] 

Volkov, Victor V. et al (2023), Raman microscopy tracks maturity of melanin intermediates in Botrytis cinerea, a plant pathogen, RSC Advances, doi: 10.1039/D2RA06439A

Vuong, Van-Quan and Qiang Cui (2023), Reparameterization of the Chemical-Potential Equalization Model with DFTB3: A Practical Balance Between Accuracy and Transferability, The Journal of Chemical Physics, doi: 10.1063/5.0132903

Wolf, Lawrence and Walter Thiel (2022), Computational Investigations into the Mechanisms of Trans-Selective Hydrogenation and Hydrometalation of Alkynes, Organometallics, doi: 10.1021/bk-2019-1317.ch003

Yahyavi, Mohammad et al (2023), Transverse circular photogalvanic effect associated with Lorentz-violating Weyl fermions, arXiv: 2301.00958

Yang, Xian P. et al (2023), Coexistence of bulk-nodal and surface-nodeless Cooper pairings in a superconducting Dirac semimetal, arXiv: 2301.01402

Zhu, Yanglin et al (2023), Surprisingly large anomalous Hall effect and giant negative magnetoresistance in half topological semimetals, arXiv: 2301.01704

Do you have news about research using computing resources at the MGHPCC? If you have an interesting project that you want to tell people about or a paper you would like listed, contact


MGHPCC Publications

Research projects

Dusty With a Chance of Star Formation
Checking the Medicine Cabinet to Interrupt COVID-19 at the Molecular Level
Not Too Hot, Not Too Cold But Still, Is It Just Right?​
Smashing Discoveries​
Microbiome Pattern Hunting
Modeling the Air we Breathe
Exploring Phytoplankton Diversity
The Computer Will See You Now
Computing the Toll of Trapped Diamondback Terrapins
Edging Towards a Greener Future
Physics-driven Drug Discovery
Modeling Plasma-Surface Interactions
Sensing Subduction Zones
Neural Networks & Earthquakes
Small Stars, Smaller Planets, Big Computing
Data Visualization using Climate Reanalyzer
Getting to Grips with Glassy Materials
Modeling Molecular Engines
Forest Mapping: When the Budworms come to Dinner
Exploring Thermoelectric Behavior at the Nanoscale
The Trickiness of Talking to Computers
A Genomic Take on Geobiology
From Grass to Gas
Teaching Computers to Identify Odors
From Games to Brains
The Trouble with Turbulence
A New Twist
A Little Bit of This... A Little Bit of That..
Looking Like an Alien!
Locking Up Computing
Modeling Supernovae
Sound Solution
Lessons in a Virtual Test Tube​
Crack Computing
Automated Real-time Medical Imaging Analysis
Towards a Smarter Greener Grid
Heading Off Head Blight
Organic Light-Harvesting Antennae
Art and AI
Excited by Photons
Tapping into an Ocean of Data
Computing Global Change
Star Power
Engineering the Human Microbiome
Computing Social Capital
Computers Diagnosing Disease
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Collaborative projects

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Outreach & Education Projects

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