January 2023 Publications

January 31, 2023

Aviation lightning prevention? ​Numerical-relativity-informed perturbation
theory​?​ Probabilistic genotype-phenotype mapping?
This month's selection of publications featuring research using the MGHPCC.

Chen, Zhao and Nan Wang (2023), Learning dynamics from coarse/noisy data with scalable symbolic regression, Mechanical Systems and Signal Processing, doi: 10.1016/j.ymssp.2023.110147

Cone, Cooper et al (2023), Deep Reinforcement Learning Reward Model Parameter Optimization with Surrogate Modelling, Aerospace Research Central, doi: 10.2514/6.2023-2155

Dougherty, Maureen et al (2022), The ERN Cryo-EM Federated Instrument Pilot Project: Phase 1,
IEEE 2022 4th Annual Workshop on Extreme-scale Experiment-in-the-Loop Computing (XLOOP), 
doi: 10.1109/XLOOP56614.2022.00009

Fernandez, John E. et al (2023), Comparison of F-76 and JP-8 Fuel Surrogates in a Low-Pressure Swirl Burner, Aerospace Research Center, doi: 10.2514/6.2023-0782

Guerra-Garcia, Carmen et al (2023), Addressing the Lightning Protection Needs of Novel Aircraft, Aerospace Research Central, doi: 10.2514/6.2023-2618

Husseini, Jamal et al (2023), Generation of 2-D Fiber Reinforced Composite Microstructures with Statistically Equivalent Features Using Machine Learning and Adaptive Data Generation, Aerospace Research Center, doi: 10.2514/6.2023-1267

Islam, Jousif et al (2023), Remnant black hole properties from numerical-relativity-informed perturbation theory and implications for waveform modelling, arXiv: 2301.07251 [gr-qc]

Islam, Rajibul et al (2022), Switchable large-gap quantum spin Hall state in the two-dimensional MSi2Z4 class of materials, Physical Review B, doi: 10.1103/PhysRevB.106.245149

Jain, Aastha et al (2023), Regulation of Ebola GP conformation and membrane binding by the chemical environment of the late endosome, biorXiv, doi: 10.1101/2023.01.18.524651

Lee, Sanghun et al (2023), A comparison between similarity matrices for principal component analysis to assess population stratification in sequenced genetic data sets Get access Arrow, Briefings on Bioinformatics, doi: 10.1093/bib/bbac611

Matlock, Alex et al (2023), Multiple-scattering simulator-trained neural network for intensity diffraction tomography, Optics Express, doi: 10.1364/OE.477396

Mazzola, Frederico et al (2023), Discovery of a Magnetic Dirac System with a Large Intrinsic Nonlinear Hall Effect, Nano. Lett., doi: 10.1021/acs.nanolett.2c04194

Milstein, Adam B et al (2023), Detail Enhancement of AIRS/AMSU Temperature and Moisture Profiles Using a 3D Deep Neural Network, Artificial Intelligence for the Earth Systems, doi: 10.1175/AIES-D-22-0037.1

Pavan, Colin A. et al (2023), Modeling Flame Speed Modification by Nanosecond Pulsed Discharges to Inform Experimental Design, Aerospace Research Center, doi: 10.2514/6.2023-2056

Podolak, M. et al (2023), An equation of state of CO for use in planetary modeling, Icarus, doi: 10.1016/j.icarus.2023.115424

Sappington, Anna and Vaibhav Mohanty (2023), Probabilistic Genotype-Phenotype Maps Reveal Mutational Robustness of RNA Folding, Spin Glasses, and Quantum Circuits, arXiv: 2301.01847 [cond-mat.stat-mech]

Schiefelbein, M.C. et al (2023), Automated Contact Tracing Assessment, LL Technical Report 

Starko, S. et al (2023), Marine heatwaves threaten cryptic coral diversity and erode 2 associations amongst coevolving partners, bioRxiv, doi: 10.1101/2023.01.07.522953

Teng, Yanting et al (2023), Classifying topological neural network quantum states via diffusion maps, 
arXiv: 2301.02683 [quant-ph] 

Volkov, Victor V. et al (2023), Raman microscopy tracks maturity of melanin intermediates in Botrytis cinerea, a plant pathogen, RSC Advances, doi: 10.1039/D2RA06439A

Vuong, Van-Quan and Qiang Cui (2023), Reparameterization of the Chemical-Potential Equalization Model with DFTB3: A Practical Balance Between Accuracy and Transferability, The Journal of Chemical Physics, doi: 10.1063/5.0132903

Wolf, Lawrence and Walter Thiel (2022), Computational Investigations into the Mechanisms of Trans-Selective Hydrogenation and Hydrometalation of Alkynes, Organometallics, doi: 10.1021/bk-2019-1317.ch003

Yahyavi, Mohammad et al (2023), Transverse circular photogalvanic effect associated with Lorentz-violating Weyl fermions, arXiv: 2301.00958

Yang, Xian P. et al (2023), Coexistence of bulk-nodal and surface-nodeless Cooper pairings in a superconducting Dirac semimetal, arXiv: 2301.01402

Zhu, Yanglin et al (2023), Surprisingly large anomalous Hall effect and giant negative magnetoresistance in half topological semimetals, arXiv: 2301.01704

Do you have news about research using computing resources at the MGHPCC? If you have an interesting project that you want to tell people about or a paper you would like listed, contact


MGHPCC Publications

If your work involves computing intensive research we would love to showcase it at the MGHPCC booth this November.

To be considered, please use this short form or drop an email to with your name, organization, project title, and a brief description of the project. Find out more

Research projects

Dusty With a Chance of Star Formation
Checking the Medicine Cabinet to Interrupt COVID-19 at the Molecular Level
Not Too Hot, Not Too Cold But Still, Is It Just Right?​
Smashing Discoveries​
Microbiome Pattern Hunting
Modeling the Air we Breathe
Exploring Phytoplankton Diversity
The Computer Will See You Now
Computing the Toll of Trapped Diamondback Terrapins
Edging Towards a Greener Future
Physics-driven Drug Discovery
Modeling Plasma-Surface Interactions
Sensing Subduction Zones
Neural Networks & Earthquakes
Small Stars, Smaller Planets, Big Computing
Data Visualization using Climate Reanalyzer
Getting to Grips with Glassy Materials
Modeling Molecular Engines
Forest Mapping: When the Budworms come to Dinner
Exploring Thermoelectric Behavior at the Nanoscale
The Trickiness of Talking to Computers
A Genomic Take on Geobiology
From Grass to Gas
Teaching Computers to Identify Odors
From Games to Brains
The Trouble with Turbulence
A New Twist
A Little Bit of This... A Little Bit of That..
Looking Like an Alien!
Locking Up Computing
Modeling Supernovae
Sound Solution
Lessons in a Virtual Test Tube​
Crack Computing
Automated Real-time Medical Imaging Analysis
Towards a Smarter Greener Grid
Heading Off Head Blight
Organic Light-Harvesting Antennae
Art and AI
Excited by Photons
Tapping into an Ocean of Data
Computing Global Change
Star Power
Engineering the Human Microbiome
Computing Social Capital
Computers Diagnosing Disease
All Research Projects

Collaborative projects

ALL Collaborative PROJECTS

Outreach & Education Projects

See ALL Scholarships
100 Bigelow Street, Holyoke, MA 01040