February 2024 Publications

February 14, 2024

Imaging the ocean? Inverse indentation problems? Digital-analog quantum learning on Rydberg atom arrays? A selection of recent publications featuring research using the MGHPCC.

Akyürek, Afra Feyza et al (2024), Deductive Closure Training of Language Models for Coherence, Accuracy, and Updatability, arXiv: 2401.08574, [cs.CL] 

Berman, E.M. et al (2024), Efficient PSF Modeling with ShOpt.jl: A PSF Benchmarking Study with JWST NIRCam Imaging, arXiv: 2401.11625 [astro-ph.IM] 

Brandão, Lilliana and Christian Reece (2024), Non-Steady State Validation of Kinetic Models for Ethylene Epoxidation over Silver Catalysts, ChemRxiv, doi: 10.26434/chemrxiv-2024-1f185

Curtis, Olivia et al (2024), Properties of Voids and Void Galaxies in the TNG300 Simulation, arXiv: 2401.02322 [astro-ph.GA] 

DeBossu, Charlotte A., "An Evaluation of Object Detection Algorithms Applied to Oceanographic Midwater Imagery" (2023), URI Master's Thesis

De Luca, Andrea et al (2024), Universality classes for purification in nonunitary quantum processes, arXiv: 2312.17744 [cond-mat.stat-mech] 

D’Emidio, Jonathan and Anders W. Sandvik (2024), Entanglement entropy and deconfined criticality: emergent SO(5) symmetry and proper lattice bipartition, arXiv: 2401.14396 [cond-mat.str-el] 

Farnsworth, Amanda and Emre Gencer (2024), The elephant in the room: embodied emissions in
our power sector, via ResearchSquare, doi: 10.21203/ 

Gemmell, Patrick (2024), Linking phenotypic and genotypic variation: a relaxed phylogenetic approach using the probabilistic programming language Stan, bioRXiv, doi: 10.1101/2024.01.23.576950

Haspel, N et al (2024), Allosteric Activation of RhoA Complexed with p115-RhoGEF Deciphered by Conformational Dynamics, J. Chem. Inf. Model., doi: 10.1021/acs.jcim.3c01412 

Jiao, Q et al (2024), A machine learning perspective on the inverse indentation problem: uniqueness, surrogate modeling, and learning elasto-plastic properties from pile-up, Journal of the Mechanics and Physics of Solids, doi: 10.1016/j.jmps.2024.105557

Kothalawala, Veenavee Nipunika et al (2024), Compton scattering study of strong orbital delocalization in a LiNiO2 cathode, Physical Review B, doi: 10.1103/PhysRevB.109.035139 

Landen Gozashti & Hopi E. Hoekstra (2024), Accounting for diverse transposable element landscapes is key to developing and evaluating accurate de novo annotation strategies, Genome Biology, doi: 10.1186/s13059-023-03118-1 

Leonard, A. et al (2024), Varying primordial state fractions in exo- and endothermic SIDM simulations of Milky Way-mass haloes, arXiv: 2401.13727 [astro-ph.CO] 

Lopez, L and Wesley Harris (2024), Effect of Wall Temperature on Turbulent Shock Wave-Boundary Layer Interaction (SBLI) at Mach 8.2, AIAA SCITECH 2024 Forum, 8-12 January 2024, Orlando, FL, doi: 10.2514/6.2024-2382

Lu, J.Z. et al (2024), Digital-analog quantum learning on Rydberg atom arrays, arXiv: 2401.02940 [quant-ph]

Luo, Shuang et al (2024), Water Electric Field Induced Modulation of the Wetting of Hexagonal Boron Nitride: Insights from Multiscale Modeling of Many-Body Polarization, ACS Nano, doi: 10.1021/acsnano.3c09811

Mangal, Deepak et al (2024), Predicting yielding in attractive colloidal gels, Physical review E, doi: 10.1103/PhysRevE.109.014602

Markiewicz R.S. and A. Bansil (2024), Theory of cuprate pseudogap as antiferromagnetic order with charged domain walls, Physical Review B, doi: 10.1103/PhysRevB.109.045116

Miyamoto, A et al (2024), Identifying Procedure-Conforming Behaviors in Trajectory Data for Higher-Fidelity Operational Safety Analysis, AIAA SCITECH 2024 Forum, 8-12 January 2024, Orlando, FL, doi: 10.2514/6.2024-0790

Pathreeker, S et al (2024), Hexagonal Boron Nitride Modulates Crystallinity and Charge Mobility in Poly(ethylene oxide)–NaNO3 Electrolytes, J. Phys. Chem. C, doi: 10.1021/acs.jpcc.3c06455

Paul, S et al (2024), The molecular basis for the increased stability of the FUS-LC fibril at the anionic membrane- and air-water interfaces, bioRxiv, doi: 10.1101/2024.01.15.575617

Reuther, Albert et al (20240, Interactive and Urgent HPC: Challenges and Opportunities, arXiv: 2401.14550[cs.DC] 

Rigon, G et al (2024), Development of a platform for experimental and computational studies of magnetic and radiative effects on astrophysically-relevant jets at OMEGA, arXiv:2401.10779 [physics.plasm-ph] 

Rodriguez-Fernandez, V et al (2024), Towards a Machine Learning-Based Approach to Predict Space Object Density Distributions, AIAA SCITECH 2024 Forum, 8-12 January 2024, Orlando, FL, doi: 10.2514/6.2024-1673 

Rocks, Jason P. et al (2024), Topological characterization of the continuum of allosteric response, arXiv: 2401.13861 [cond-mat.soft] 

Salvalaglio, Marco et al (2024), Persistent homology and topological statistics of hyperuniform point clouds, arXiv: 2401.13123 [cond-mat.stat-mech] 

Shi, Z (2024), Facilitating decision-making in large distributed systems with selfish and adversarial actors, BU Doctoral Dissertation

Shubitigze, Tormike et al (2024), Localization landscape of optical waves in multifractal photonic membranes, arXiv: 2401.15244 [physics.optics] 

Wang, Tongkun et al (2024), Removing Fluoride from Double Four-Membered Rings Yielding Defect-Free Zeolites under Mild Conditions Using Ozone, Chem. Mater., doi: 10.1021/acs.chemmater.3c02695

Ye, L. et al (2024), Hopping frustration-induced flat band and strange metallicity in a kagome metal, Nature Physics, doi: 10.1038/s41567-023-02360-5

Zhang, Y. et al (2024), Data center and load aggregator coordination towards electricity demand response, Sustainable Computing: Informatics and Systems, doi: 10.1016/j.suscom.2024.100957

Do you have news about research using computing resources at the MGHPCC? If you have an interesting project that you want to tell people about or a paper you would like listed, contact


MGHPCC Publications

Research projects

Dusty With a Chance of Star Formation
Checking the Medicine Cabinet to Interrupt COVID-19 at the Molecular Level
Not Too Hot, Not Too Cold But Still, Is It Just Right?​
Smashing Discoveries​
Microbiome Pattern Hunting
Modeling the Air we Breathe
Exploring Phytoplankton Diversity
The Computer Will See You Now
Computing the Toll of Trapped Diamondback Terrapins
Edging Towards a Greener Future
Physics-driven Drug Discovery
Modeling Plasma-Surface Interactions
Sensing Subduction Zones
Neural Networks & Earthquakes
Small Stars, Smaller Planets, Big Computing
Data Visualization using Climate Reanalyzer
Getting to Grips with Glassy Materials
Modeling Molecular Engines
Forest Mapping: When the Budworms come to Dinner
Exploring Thermoelectric Behavior at the Nanoscale
The Trickiness of Talking to Computers
A Genomic Take on Geobiology
From Grass to Gas
Teaching Computers to Identify Odors
From Games to Brains
The Trouble with Turbulence
A New Twist
A Little Bit of This... A Little Bit of That..
Looking Like an Alien!
Locking Up Computing
Modeling Supernovae
Sound Solution
Lessons in a Virtual Test Tube​
Crack Computing
Automated Real-time Medical Imaging Analysis
Towards a Smarter Greener Grid
Heading Off Head Blight
Organic Light-Harvesting Antennae
Art and AI
Excited by Photons
Tapping into an Ocean of Data
Computing Global Change
Star Power
Engineering the Human Microbiome
Computing Social Capital
Computers Diagnosing Disease
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Outreach & Education Projects

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