February Publications

March 2, 2021

Deep time weevil evolution? Using machine learning to derive historic  atmospheric particulate matter distributions? Tracking the role of BDNF in brain structure and function? Designing batteries better suited to fluctuating renewables? This month's selection of publications featuring research using the MGHPCC.

Carrasco Pro, Sebastian et al (2021), Prediction of genome-wide effects of single nucleotide variants on transcription factor binding, Scientific Report, doi: 10.1038/s41598-020-74793-4
Carrasco Pro, Sebastian (2020), Transcriptional Regulation Landscape in Health and Disease, Boston University Doctoral Dissertation, ProQuest: 28089766
M. Celeste Artale et al (2021), The large-scale distribution of highly ionized metals in IllustrisTNG, arXiv:2102.01092 [astro-ph.GA]
Maria Lourdes Chamorro, Bruno A.S. de Medeiros, Brian D. Farrell (2021), First phylogenetic analysis of Dryophthorinae (Coleoptera, Curculionidae) based on structural alignment of ribosomal DNA reveals Cenozoic diversification, Ecology and Evolution, doi: 10.1002/ece3.7131
Jonathan Cohen et al (2021), Economic controls co-design of hybrid microgrids with tidal/PV generationand lithium ion/flow battery storage, arXiv:2102.05197
Haiying Gao and Cong Li (2021), Lithospheric Formation and Evolution of Eastern North American Continent, Geophysical Research Letters, doi: 10.1029/2020GL091074
William Gao, Thomas A. Jones and Elena Rivas (2021), Discovery of 17 conserved structural RNAs in fungi, biorXiv, doi: 10.1101/2021.02.01.429235
C. M. Golja, L. W. Chew, J. A. Dykema, D. W. Keith (2021), Aerosol Dynamics in the Near Field of the SCoPEx Stratospheric Balloon Experiment, Journal of Geophysical Research - Atmospheres, doi: 10.1029/2020JD033438
Jing Li et al (2021), Estimation of ambient PM2.5 in Iraq and Kuwait from 2001 to 2018 using machine learning and remote sensing, Environment International, doi: 10.1016/j.envint.2021.106445
Shuo Li et al (2021), The genetics of circulating BDNF: towards understanding the role of BDNF in brainstructure and function in middle and old ages, Brain Communications, doi: 10.1093/braincomms/fcaa176
Pavitra Muralidhar and Carl Veller (2021), Dominance shifts increase the likelihood of soft selective sweeps, bioRxiv, doi: 10.1101/2021.02.22.432386
Vasaki Ponnusamy et al (2021), Green Energy in Data Centers Using Internet of Things, Role of IoT in Green Energy Systems, doi: 10.4018/978-1-7998-6709-8.ch010
Vista Sohrab et al (2021), TEfinder: A Bioinformatics Pipeline for Detecting New Transposable Element Insertion Events in Next-Generation Sequencing Data, Genes, doi: 10.3390/genes12020224
Do you have news about research using computing resources at the MGHPCC? If you have an interesting project that you want to tell people about or a paper you would like listed, contact


MGHPCC Publications

Research projects

Dusty With a Chance of Star Formation
Checking the Medicine Cabinet to Interrupt COVID-19 at the Molecular Level
Not Too Hot, Not Too Cold But Still, Is It Just Right?​
Smashing Discoveries​
Microbiome Pattern Hunting
Modeling the Air we Breathe
Exploring Phytoplankton Diversity
The Computer Will See You Now
Computing the Toll of Trapped Diamondback Terrapins
Edging Towards a Greener Future
Physics-driven Drug Discovery
Modeling Plasma-Surface Interactions
Sensing Subduction Zones
Neural Networks & Earthquakes
Small Stars, Smaller Planets, Big Computing
Data Visualization using Climate Reanalyzer
Getting to Grips with Glassy Materials
Modeling Molecular Engines
Forest Mapping: When the Budworms come to Dinner
Exploring Thermoelectric Behavior at the Nanoscale
The Trickiness of Talking to Computers
A Genomic Take on Geobiology
From Grass to Gas
Teaching Computers to Identify Odors
From Games to Brains
The Trouble with Turbulence
A New Twist
A Little Bit of This... A Little Bit of That..
Looking Like an Alien!
Locking Up Computing
Modeling Supernovae
Sound Solution
Lessons in a Virtual Test Tube​
Crack Computing
Automated Real-time Medical Imaging Analysis
Towards a Smarter Greener Grid
Heading Off Head Blight
Organic Light-Harvesting Antennae
Art and AI
Excited by Photons
Tapping into an Ocean of Data
Computing Global Change
Star Power
Engineering the Human Microbiome
Computing Social Capital
Computers Diagnosing Disease
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Collaborative projects

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Outreach & Education Projects

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