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September Publications

October 1, 2019

Below is a selection of papers that appeared in September 2019 reporting the results of research using the Massachusetts Green High Performance Computing Center (MGHPCC), or acknowledging the use of Harvard’s Odyssey Cluster, Northeastern’s Discovery Cluster, the Boston University Shared Computing Cluster and MIT's Engaging Cluster all of which are housed at the MGHPCC.
Amin Aboubrahim and Pran Nath (2019), LHC phenomenology with hidden sector dark matter: a long-lived stau and heavy Higgs in an observable range, arXiv: 1909.08684 [hep-ph]
Gabriel Birzu, Sakib Matin, Oskar Hallatschek, Kirill S. Korolev (2019), Genetic drift in range expansions is very sensitive to density dependence in dispersal and growth, Ecology Letters, doi: 10.1111/ele.13364
William J. Cunningham, and Sumati Surya (2019), Dimensionally Restricted Causal Set Quantum Gravity: Examples in Two and Three Dimensions, arXiv: 1908.11647 [gr-qc]
Ewan S. Douglas, John Debes, Kian Milani, Yinzi Xin, Kerri L. Cahoy, Nikole K. Lewis, Bruce Macintosh (2019), Proceedings Volume 11117, Techniques and Instrumentation for Detection of Exoplanets, doi: 10.1117/12.2529488
Sam Hadden (2019), An Integrable Model for the Dynamics of Planetary Mean Motion Resonances, arXiv: 1909.05264 [astro-ph.EP]
Dahlia R. Klein, David MacNeill, Qian Song, Daniel T. Larson, Shiang Fang, Mingyu Xu, R. A. Ribeiro, P. C. Canfield, Efthimios Kaxiras, Riccardo Comin & Pablo Jarillo-Herrero (2019), Enhancement of interlayer exchange in an ultrathin two-dimensional magnet, Nature Physics, doi: 10.1038/s41567-019-0651-0
Lachlan Lancaster, Cara Giovanetti, Philip Mocz, Yonatan Kahn, Mariangela Lisanti, David N. Spergel (2019), Dynamical Friction in a Fuzzy Dark Matter Universe, arXiv: 1909.06381 [astro-ph.CO]
Yuyu Li, Pablo Ferreyra, Anna K. Swan, Roberto Paiella (2019), Current-Driven Terahertz Light Emission from Graphene Plasmonic Oscillations, ACS Photonics, doi: 10.1021/acsphotonics.9b01037
Chungwen Liang, Sergey N. Savinov, Jasna Fejzo, Stephen J. Eyles, Jianhan Chen (2019), Modulation of Amyloid-β42 Conformation by Small Molecules Through Nonspecific Binding, J. Chem. Theory Comput., doi: 10.1021/acs.jctc.9b00599
Loïc M. Roch, Semion K. Saikin, Florian Häse, Pascal Friederich, Randall H. Goldsmith, Salvador León, and Alán Aspuru-Guzik (2019), From absorption spectra to charge transfer in PEDOT nanoaggregates with machine learning, arXiv: 1909.10768 [physics.chem-ph]
Jayson R. Vavrek, Brian S. Henderson, Areg Danagoulian (2019), Validation of Geant4’s G4NRF module against nuclear resonance fluorescence data from 238U and 27Al, Nuclear Instruments and Methods in Physics Research Section B: Beam Interactions with Materials and Atoms, doi: 10.1016/j.nimb.2019.08.034
Huan Yang, Prasad Bandarkar, Ransom Horne, Vitor B. P. Leite, Jorge Chahine, and  Paul C. Whitford (2019), Diffusion of tRNA inside the ribosome is position-dependent, J. Chem. Phys, doi: 10.1063/1.5113814
Do you have news about research using computing resources at the MGHPCC? If you have an interesting project that you want to tell people about or a paper you would like listed, contact 

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MGHPCC Publications

Research projects

A Future of Unmanned Aerial Vehicles
Yale Budget Lab
Volcanic Eruptions Impact on Stratospheric Chemistry & Ozone
Towards a Whole Brain Cellular Atlas
Tornado Path Detection
The Kempner Institute - Unlocking Intelligence
The Institute for Experiential AI
Taming the Energy Appetite of AI Models
Surface Behavior
Studying Highly Efficient Biological Solar Energy Systems
Software for Unreliable Quantum Computers
Simulating Large Biomolecular Assemblies
SEQer - Sequence Evaluation in Realtime
Revolutionizing Materials Design with Computational Modeling
Remote Sensing of Earth Systems
Quantum Computing in Renewable Energy Development
Pulling Back the Quantum Curtain on ‘Weyl Fermions’
New Insights on Binary Black Holes
NeuraChip
Network Attached FPGAs in the OCT
Monte Carlo eXtreme (MCX) - a Physically-Accurate Photon Simulator
Modeling Hydrogels and Elastomers
Modeling Breast Cancer Spread
Impact of Marine Heatwaves on Coral Diversity
IceCube: Hunting Neutrinos
Genome Forecasting
Global Consequences of Warming-Induced Arctic River Changes
Exact Gravitational Lensing by Rotating Black Holes
Evolution of Viral Infectious Disease
Evaluating Health Benefits of Stricter US Air Quality Standards
Ephemeral Stream Water Contributions to US Drainage Networks
Energy Transport and Ultrafast Spectroscopy Lab
Electron Heating in Kinetic-Alfvén-Wave Turbulence
Discovering Evolution’s Master Switches
Dexterous Robotic Hands
Developing Advanced Materials for a Sustainable Energy Future
Detecting Protein Concentrations in Assays
Denser Environments Cultivate Larger Galaxies
Deciphering Alzheimer's Disease
Dancing Frog Genomes
Cyber-Physical Communication Network Security
Asteroid Data Mining
Analyzing the Gut Microbiome
Adaptive Deep Learning Systems Towards Edge Intelligence
Accelerating Rendering Power
ACAS X: A Family of Next-Generation Collision Avoidance Systems
Neurocognition at the Wu Tsai Institute, Yale
Computational Modeling of Biological Systems
Computational Molecular Ecology
Social Capital and Economic Mobility
Building for Floods
Better Pathogen Targeting
Tracking Environmental Health Risks
AI for Cancer Diagnosis
Microplastic-Free by Design
Supporting Data-intensive Social Science
Sailing the Symbiosis Seascape
Wrangle Range Modeling
Shining a Light on Dark Matter
Grid Responsive Data Centers
Multifunctional 3D-Printed Materials
AI Pareidolia
Computing Hidden Health Threats from Heat
Staving off the Banana Apocalypse
CRISPR Mice, Smarter Science
AI That Speaks Human About Health
A Safer Way to See Inside Cells
How Monkeys - and Machines - See in 3D
FlowER: AI for Predicting Chemical Reactions
Bone Ratios and Big Data
Supercomputers Reveal Ancient Atmospheric Battle
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