Menu

March 2025 Publications

April 3, 2025

Tunable superconductivity? Hydrogen deployment in net-zero energy systems? Environmental drivers of spatial variation in tropical forest canopy height? A selection of recent publications featuring research using the MGHPCC.

Atherton, Kathryn et al (2025), Dysbiosis in the urban tree microbiome, via ResearchSquare, doi: 10.21203/rs.3.rs-5939048/v1 

Bacik, Karol A. et al (2025), Order–disorder transition in multidirectional crowds, PNAS, doi: 10.1073/pnas.2420697122 

Baek, S.G. et al (2025), Modeling study of synergistic effects between lower hybrid and electron cyclotron current drive on EAST, Nucl. Fusion, doi: 10.1088/1741-4326/adc287

Byju, Sandra (2025), Quantifying the Dynamics and Functional Relationships of Collective Processes in a Biomolecular Assembly, Northeastern University ProQuest Dissertations & Theses,  2025, 31843008

Chakraborty, Srirupa et al (2025), Allosteric Control and Glycan Shielding Adaptations in the SARS-CoV-2 Spike from Early to Peak Virulence, via biorXiv, doi: 10.1101/2025.03.11.642723 

Dabringhaus, P. et al (2025), Dicationic Boron Derivatives of Schlenk’s and Thiele’s Hydrocarbon, Journal of the American Chemical Society, doi: 10.1021/jacs.5c00236

Eiskowitz, Skylar et al (2025), Revenue Management to Maximize Global Network Revenue for a Satellite Communication Operator, Intl. Journal of Satellite Communications and Networking, doi: 10.1002/sat.1562

Faggioli, Guglielmo et al (2025), Testing eccentric corrections to the radiation-reaction force in the test-mass limit of effective-one-body models, Physical Review D, doi: 10.1103/PhysRevD.111.044036

Hendricks, Lauren et al (2025), Fontimonas thermophila Alkane Monooxygenase (FtAlkB) Is an Alkyl Fluoride Dehalogenase, Journal of the American Chemical Society, doi: 10.1021/jacs.5c00386

Hossain, M.S., Zhang, Q., Graf, D. et al (2025), Tunable superconductivity coexisting with the anomalous Hall effect in a transition metal dichalcogenide, Nat Commun, doi: 10.1038/s41467-025-56919-2 

Keys AM, Kastner DW, Kiessling LL, Kulik HJ (2025), CH-pi Interactions Confer Orientational Flexibility in Protein-Carbohydrate Binding Sites, ChemRxiv, doi: 10.26434/chemrxiv-2025-5n9m1 

Law, Jun Wen et al (2025), Role of Technology Flexibility and Grid Coupling on Hydrogen Deployment in Net-Zero Energy Systems, Environmental Science and Technology, doi: 10.1021/acs.est.4c12166 

Li, H., Bao, S., Farzad, N. et al (2025), Spatially resolved genome-wide joint profiling of epigenome and transcriptome with spatial-ATAC-RNA-seq and spatial-CUT&Tag-RNA-seq, Nat Protoc, doi: 10.1038/s41596-025-01145-9

Liu, Shaoqing et al (2025), Environmental drivers of spatial variation in tropical forest canopy height: Insights from NASA’s GEDI spaceborne LiDAR, PNAS, doi: 10.1073/pnas.240175512

Mani, Natesan et al (2025), Cleaved vs. Uncleaved: How Furin Cleavage Reshapes the Conformational Landscape of SARS-CoV-2 Spike, via bioRxiv, doi: 10.1101/2025.03.12.642945

Pierce M.W. et al (2025), Features of double-frequency triad interactions in the nonlinear response to a moving load on a floating ice sheet, Journal of Fluid Mechanics, doi: 10.1017/jfm.2025.89

Ramachandran, Balajee et al (2025), Velcro-binding by cardiac troponin-I traps tropomyosin on actin in a low-energy relaxed state, Biochemical and Biophysical Research Communications, doi: 10.1016/j.bbrc.2025.151595 

Routh, Prahlad K. et al (2025), Unraveling the Kinetics of Hydride Formation and Decomposition at Pd–Au Bimetallic Interfaces: A Combined Spectroscopic and Computational Study, J. Am. Chem. Soc, doi: 10.1021/jacs.5c00842 

Tong Ye, Cassandra et al (2025), Learned, uncertainty-driven adaptive acquisition for photon-efficient scanning microscopy, Opt. Express, doi: 10.1364/OE.542640

Wang, Nathan B, et al (2025), Compact transcription factor cassettes generate functional, engraftable motor neurons by direct conversion, Cell Systems, doi: 10.1016/j.cels.2025.101206 

Yook, S., Solomon, S., & Wang, X. (2025), The impact of 2022 hunga tonga‐hunga ha'apai (hunga) eruption on stratospheric circulation and climate, Journal of Geophysical Research:
Atmospheres, doi: 10.1029/2024JD042943 

Yu, Hyejin et al (2025), Molecular Level Understanding of Polyethylene Terephthalate (PET) Depolymerization in Base/Alcohol Hybrid Systems, ACS Appl. Mater. Interfaces, doi: 10.1021/acsami.4c20887 

Yu, Sunmoon et al (2025), Reactivating Molecular Cobalt Catalysts for Electrochemical CO2 Conversion to Methanol, J. Am. Chem. Soc., doi: 10.1021/jacs.5c02411

​Jiang, Y. and H. Zhang (2025), Empowering genome-wide association studies via a visualizable test based on the regional association score, PNAS, doi: 10.1073/pnas.2419721122 

Do you have news about research using computing resources at the MGHPCC? If you have an interesting project that you want to tell people about or a paper you would like listed, contact 

Links

MGHPCC Publications

Research projects

The US ATLAS Northeast Tier 2 Center
Yale Budget Lab
Volcanic Eruptions Impact on Stratospheric Chemistry & Ozone
Towards a Whole Brain Cellular Atlas
Tornado Path Detection
The Kempner Institute - Unlocking Intelligence
The Institute for Experiential AI
Taming the Energy Appetite of AI Models
All Research Projects

Collaborative projects

ALL Collaborative PROJECTS

OUTREACH & EDUCATION PROJECTS

See ALL Scholarships
100 Bigelow Street, Holyoke, MA 01040