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December Publications

January 9, 2020

Below is a selection of papers that appeared in December 2019 reporting the results of research using the Massachusetts Green High Performance Computing Center (MGHPCC), or acknowledging the use of Harvard’s Odyssey Cluster, Northeastern’s Discovery Cluster, the Boston University Shared Computing Cluster and MIT's Engaging Cluster all of which are housed at the MGHPCC.

Manuel A. Buen-Abad, Raymond T. Co, and Keisuke Harigaya (2019), Common Origin of Warm Dark Matter and Dark Radiation, arXiv:1911.13267 [astro-ph.CO]
Qian Di et al (2019), Assessing NO2 Concentration and Model Uncertainty with High Spatiotemporal Resolution across the Contiguous United States Using Ensemble Model Averaging, Environ. Sci. Technol., doi: 10.1021/acs.est.9b03358
Francesca Dominici, Joel Schwartz, Qian Di,Danielle Braun, Christine Choirat, and Antonella Zanobetti (2019), Assessing Adverse Health Effects of Long-Term Exposure to Low Levels of Ambient Air Pollution: Phase 1, Research Report 200. Boston, MA:Health Effects Institute .
Robyn S. Lee PhD, Jean-François Proulx MD, Fiona McIntosh BSc, Marcel A. Behr MD, William P. Hanage PhD (2019),  Investigating within-host diversity of Mycobacterium tuberculosis reveals novel super spreaders in the Canadian North, biorXiv, doi: 10.1101/801308
Tim Menke et al (2019), Automated discovery of superconducting circuits and its application to 4-local coupler design, arXiv: 1912.0332 [quant-ph]
Julian B. Munoz, Cora Dvorkin, Francis-Yan Cyr-Racine (2019), Probing the Small-Scale Matter Power Spectrum with Large-Scale 21-cm Data, arXiv: 1911.11144 [astro-ph.CO]
E. Pavadai, M.J. Rynkiewicz, A. Ghosh, W. Lehman (2019), Docking Troponin-T onto the Tropomyosin Overlapping Domain of Thin Filaments, Biophysical Journal, doi: 10.1016/j.bpj.2019.11.3393
Oliver H E Philcox, Daniel J Eisenstein (2019), Computing the Small-Scale Galaxy Power Spectrum and Bispectrum in Configuration-Space, Monthly Notices of the Royal Astronomical Society, doi: 10.1093/mnras/stz3335
R. Graham Reynolds et al (2019), Phylogeographic and phenotypic outcomes of brown anole colonization across the Caribbean provide insight into the beginning stages of an adaptive radiation, Journal of Evolutionary Biology, doi: 10.1111/jeb.13581
SaiLavanyaa Sundar, Michael J. Rynkiewicz, Anita Ghosh, William Lehman, and Jeffrey R. Moore (2019), Cardiomyopathy Mutation Alters End-to-end Junction of Tropomyosin and Reduces Calcium Sensitivity, Biophysical Journal, doi: 10.1016/j.bpj.2019.11.3396
Steven B. Torrisi, Arunima K. Singh, Joseph H. Montoya, Tathagata Biswas and Kristin A. Persson (2019), Two-Dimensional Forms of Robust CO2 Reduction Photocatalysts, arXiv: 1912.09545 [cond-mat.mtrl-sci]
Do you have news about research using computing resources at the MGHPCC? If you have an interesting project that you want to tell people about or a paper you would like listed, contact 

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MGHPCC Publications

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Research projects

A Future of Unmanned Aerial Vehicles
Yale Budget Lab
Volcanic Eruptions Impact on Stratospheric Chemistry & Ozone
Towards a Whole Brain Cellular Atlas
Tornado Path Detection
The Kempner Institute - Unlocking Intelligence
The Institute for Experiential AI
Taming the Energy Appetite of AI Models
Surface Behavior
Studying Highly Efficient Biological Solar Energy Systems
Software for Unreliable Quantum Computers
Simulating Large Biomolecular Assemblies
SEQer - Sequence Evaluation in Realtime
Revolutionizing Materials Design with Computational Modeling
Remote Sensing of Earth Systems
Quantum Computing in Renewable Energy Development
Pulling Back the Quantum Curtain on ‘Weyl Fermions’
New Insights on Binary Black Holes
NeuraChip
Network Attached FPGAs in the OCT
Monte Carlo eXtreme (MCX) - a Physically-Accurate Photon Simulator
Modeling Hydrogels and Elastomers
Modeling Breast Cancer Spread
Impact of Marine Heatwaves on Coral Diversity
IceCube: Hunting Neutrinos
Genome Forecasting
Global Consequences of Warming-Induced Arctic River Changes
Exact Gravitational Lensing by Rotating Black Holes
Evolution of Viral Infectious Disease
Evaluating Health Benefits of Stricter US Air Quality Standards
Ephemeral Stream Water Contributions to US Drainage Networks
Energy Transport and Ultrafast Spectroscopy Lab
Electron Heating in Kinetic-Alfvén-Wave Turbulence
Discovering Evolution’s Master Switches
Dexterous Robotic Hands
Developing Advanced Materials for a Sustainable Energy Future
Detecting Protein Concentrations in Assays
Denser Environments Cultivate Larger Galaxies
Deciphering Alzheimer's Disease
Dancing Frog Genomes
Cyber-Physical Communication Network Security
Asteroid Data Mining
Analyzing the Gut Microbiome
Adaptive Deep Learning Systems Towards Edge Intelligence
Accelerating Rendering Power
ACAS X: A Family of Next-Generation Collision Avoidance Systems
Neurocognition at the Wu Tsai Institute, Yale
Computational Modeling of Biological Systems
Computational Molecular Ecology
Social Capital and Economic Mobility
Building for Floods
Better Pathogen Targeting
Tracking Environmental Health Risks
AI for Cancer Diagnosis
Microplastic-Free by Design
Supporting Data-intensive Social Science
Sailing the Symbiosis Seascape
Wrangle Range Modeling
Shining a Light on Dark Matter
Grid Responsive Data Centers
Multifunctional 3D-Printed Materials
AI Pareidolia
Computing Hidden Health Threats from Heat
Staving off the Banana Apocalypse
CRISPR Mice, Smarter Science
AI That Speaks Human About Health
A Safer Way to See Inside Cells
How Monkeys - and Machines - See in 3D
FlowER: AI for Predicting Chemical Reactions
Bone Ratios and Big Data
Supercomputers Reveal Ancient Atmospheric Battle
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